| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0839 |
|---|
| Symbol | |
|---|
| ID | 3909097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 953256 |
|---|
| End bp | 954449 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637882732 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484461 |
|---|
| Protein GI | 86747965 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4093] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.268531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA TTCCCCCGAC CACCCGCCGC CGGCTGTGGC CGTTGTACCT GATGCCGACG
CTGCTGCTGA TCGCCGCGAT CGGCTGGAGC CTGTTCTGGT TCGTCTCTGC GTCGCAGGTC
GACCGCATCG TCGACAATTG GCGCGCGCGC GAGGCAGCCG CCGGCCGGGT CTATGAGTGC
GGCGACCGCA CCGTCGCCGG CTTCCCGTTC CGGCTCGAAG TGCGCTGCAC CGACGCCAGC
GTCGCGCTGA CCTCGCAGAC CGCCGAACAG GTGGCGAGCC GGACGCCGCT GACGGCGAAG
CTCGGCGAGA TCCTGGTGGT GGCGCAGATC TACGATCCGC GCCTGTTGAT CGCCGAGTTC
AAGGGCCCGG CGAGCTTCGC CGATCGCGGC CGGCCGACCT CGATGGTGCT GAACTGGGCC
ACCGCGCGCA GCAGCGTCGC CGGCCTGCCC GGGCCGCCGC AGCGTGTCGC ACTGGTGTTC
GATGCGCCGG CGCTCGACCG CGTCGATGGC GCGACGCAGA CGCCGCTGGC CCGCGCCCGC
CACGCCGAAA TGCATGCGCG GCAGGTCGAA GGCCCAGCGC CCGATCAGCA GCGGATCGAG
ACCGATTTCC GCTTCGAGGG CGCCAGCATT CAGGAGCTGC ATCCGCTGCT CGCCGAGCTG
TTCGACGCGA ATCTACGCGT GACGCTGAGC GGGCTGAAGG ATTTTCGCCC CAAGCCGTGG
CCGGAGCGCT TCCGCGAATT GCAGGCCGCC GGCGGCCGGA TCGAAATCAC TCAGGCGCGG
ATTCAGCAGG GCGGGATGAT CGCGACTGCG ATCGGTGCGC TCGGGCTGAC CCCGGCGGGG
AATGTCGACG GCGAATTGCA GATGGTAGTC GCGGGGCTCG ACCAGGTGAT CCCCAAGCTC
GGCATCGACA AGGTGCTGGA ACAGGGCGTG TCGCAATCGA CGCTCGATCG CCTCGCGCCG
GGCGTGCGCG CCAACGACGT CAACAACGTG CTCGGCGCGC TCGACCGCGC CATCCCCGGC
CTCGGCCGTG TGGTGCGCCA GAACGCCAAT GTCGGCGTCG CCGCCGGCAT CAACGCGCTC
GGCCAGGAAG CCACCCTCGA AGGCCGCCCC GCCCGCGCCG TCCCGCTGCG CTTCGTCGAC
GGCGCCGTGA TGCTCGGCCC GATCAAGGTC GCGCAGATGA AGCCTCTGTT CTGA
|
|---|
| Protein sequence | MTDIPPTTRR RLWPLYLMPT LLLIAAIGWS LFWFVSASQV DRIVDNWRAR EAAAGRVYEC
GDRTVAGFPF RLEVRCTDAS VALTSQTAEQ VASRTPLTAK LGEILVVAQI YDPRLLIAEF
KGPASFADRG RPTSMVLNWA TARSSVAGLP GPPQRVALVF DAPALDRVDG ATQTPLARAR
HAEMHARQVE GPAPDQQRIE TDFRFEGASI QELHPLLAEL FDANLRVTLS GLKDFRPKPW
PERFRELQAA GGRIEITQAR IQQGGMIATA IGALGLTPAG NVDGELQMVV AGLDQVIPKL
GIDKVLEQGV SQSTLDRLAP GVRANDVNNV LGALDRAIPG LGRVVRQNAN VGVAAGINAL
GQEATLEGRP ARAVPLRFVD GAVMLGPIKV AQMKPLF
|
|---|
| |