Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0829 |
Symbol | |
ID | 3909644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 942779 |
End bp | 944044 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882722 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_484451 |
Protein GI | 86747955 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATT TCGACTACCG CGACGGCGTG CTGCACGCCG AAGGCGTTGG CCTTGAAGTG CTCGCGCGCG AGGTCGGCAC GCCGTTTTAT TGCTACTCCA CCGCGACGCT GGAGCGGCAC TACCGCGTCT TCAGCGAAGC CTTCGCCGGC ACCGACGCGC TGGTCTGCTA CGCGATGAAG GCGAACTCGA ATCAATCGGT GTTGCGCACG CTGGCCAGGC TCGGCGCCGG TGCCGATGTT GTTTCGGGCG GTGAATTGCA GCGCGCGCTG GCCGCGGGCA TCCCGGCGAG CAAGATCGTG TTCTCCGGCG TCGGCAAGAC CGAGGCCGAA TTGCGCGCCG CGCTGGCGCA CGACATCAAG TGCCTCAACG TCGAATCCGA GCCCGAGCTG GAATTGCTGT CGCGGCTCGC GGTCGAGACC GGGCGGACCG CGCGGATTTC GATCCGGGTC AATCCGGACG TCGATTCCGG CACCCACGCC AAGATCTCGA CCGGCAAGTC GGAGAACAAA TTCGGCATTC CGCTCGTGCA TGCGCGTGAG GTCTATGCGC GCGCGGCGAA GCTGCCCGGC ATCCTGATAT CGGGCGTCGA CGTCCATATC GGCAGCCAGA TCATCGATCT GGCGCCGATG GAGGCCGCGT TCCGCCTCGT CGCCGAATTC GTGCACCAGT TGCGCGGCGA TGGCCACACG ATCAGTCACG TCGATTTCGG CGGCGGCCTC GGCATTCCGT ACTACGAGGA TCGTGACGCG CCGCCGGAGC CGTTCGCCTA TGCTCAGATG GTCAAGCGCG TCACCCACAA TCTCGGCTGC GCGCTGCTGT TCGAGCCGGG CCGGATGATC GTCGGCAATG CCGGCATCCT GGTCGCGCGC GTGATCTATG TGAAGCACGG CGACGGCAAG ACCTTCGTGA TCATCGATGC GGCGATGAAC GATTTGATCC GGCCGACGCT GTACGAGGCC TATCACGAAA TTCTGCCGGT GGCGGCCCCC GCGCCCGGCG CCAAGCTGAT CACCGCCGAC GTCGTCGGCC CGGTCTGCGA GACCGGCGAT TACCTCGCGC TCGACCGCCA ACTGCCGGAG CTGAAATCCG GCGACCTGAT CGCGATCATG ACGGCGGGCG CCTATGGCGC GGTACAGGCG TGTACCTACA ACACCCGCGC GCTGGTGCCC GAAGTGCTGG TCAAGGACGA TCAGTACGCG GTGGTGCGCC CGCGCATCGA GGTCGAGCAA CTGATCGCGC TGGACCGGCC GGCGCCGTGG CTGTGA
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Protein sequence | MRHFDYRDGV LHAEGVGLEV LAREVGTPFY CYSTATLERH YRVFSEAFAG TDALVCYAMK ANSNQSVLRT LARLGAGADV VSGGELQRAL AAGIPASKIV FSGVGKTEAE LRAALAHDIK CLNVESEPEL ELLSRLAVET GRTARISIRV NPDVDSGTHA KISTGKSENK FGIPLVHARE VYARAAKLPG ILISGVDVHI GSQIIDLAPM EAAFRLVAEF VHQLRGDGHT ISHVDFGGGL GIPYYEDRDA PPEPFAYAQM VKRVTHNLGC ALLFEPGRMI VGNAGILVAR VIYVKHGDGK TFVIIDAAMN DLIRPTLYEA YHEILPVAAP APGAKLITAD VVGPVCETGD YLALDRQLPE LKSGDLIAIM TAGAYGAVQA CTYNTRALVP EVLVKDDQYA VVRPRIEVEQ LIALDRPAPW L
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