Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0791 |
Symbol | |
ID | 3909279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 886386 |
End bp | 887612 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882683 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_484413 |
Protein GI | 86747917 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.318228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAGA CCAATACGCC CAATCCGAAG CCCTCCATCG CCATCCCCGA CACCGCGCAT TTCCGCCGCG AAACCCGGCT GGTGCATTCC GGCAGCCTGC GCTCGCAATA TGGCGAGACC TCCGAGGCGC TGTTTCTGAC CCAGGGCTTC GTCTACGACA GCGCCGAGCA ATGCGAGGCG CGCTTCACCG GCGACGACGC CGGCTTCCAA TATTCGCGGT TCTCCAATCC GACGGTGTTC AGCTTCGAGC AGCGGATGGC GGAATTCGAG GGCGCCGAGG CGGCGCGCGC CACCGCCACC GGCATGGCCG CGGTGACCGC CGCGATGCTG GCGCCGCTGC GCGCCGGCGA TCACGTCGTG GCCTCGAAGG CGATGTTCGG CTCGTGCCGC TACGTGGTCG AGGATCTGCT GCCGCGCTAC GGCATCGAAT CGACGCTGGT CGACGGCCTC GATCTCGACC AGTGGCAGAA GGCGCTGCGC CCGAACACCA GGACCTGCTT CCTCGAAAGC CCGACCAATC CGACGCTCGA CGTGCTCGAC ATCGGCGCGA TCGCCGAGAT CGCGCATGCC GGCGGCGCGC GGCTCGTCGT CGACAACGTG TTCGCGACGC CGATCTGGCA GAGCCCGCTC GCGCTCGGCG CCGACGTCGT GGTGTACTCC GCCACCAAGC ATATCGACGG CCAGGGCCGC TGCCTCGGCG GCGTGGTGCT GTCGACGCAG GCGTTCATCG AGGAGCACAT CCAGATGTAT CTGCGCCAGA CCGGGCCGTC GCTGTCGCCG TTCAACGCCT GGGTACTGCT GAAGGGGCTG GAGACGCTGG CGGTCCGGGT TCGCGCCCAG ACTGAGACGG CGGCGGCGAT TGCCGATGCG CTGGCCGGCC ATCCGAAGAT CCCGCGGCTG GTCTATCCCG GCCGCGCCGA CCATCCGCAG GCCGCCACGG TCAAGAAGCA GATGGGCGCC GGCTCGACGC TGATCGGCTT CGAGGTCGCG GGCGGCAAGG CGGAAGCGTT CCGCTTCCTC AACGCGCTGA AGCTGATCCG GATCAGCAAC AATCTCGGCG ACGCCAAGAG CCTGGTCACG CATCCGGCGA CGACGACCCA TCAGCGGCTG AAGCCGGAAG CGCGCGCCGA ACTCGGCATC AGCGAAGGCT TCATCCGCTA TTCGGTCGGC CTCGAGCACA AGGACGACCT GATCGAGGAC ATCGTCGCGG CGCTGGAGAA GGTGTAG
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Protein sequence | MSETNTPNPK PSIAIPDTAH FRRETRLVHS GSLRSQYGET SEALFLTQGF VYDSAEQCEA RFTGDDAGFQ YSRFSNPTVF SFEQRMAEFE GAEAARATAT GMAAVTAAML APLRAGDHVV ASKAMFGSCR YVVEDLLPRY GIESTLVDGL DLDQWQKALR PNTRTCFLES PTNPTLDVLD IGAIAEIAHA GGARLVVDNV FATPIWQSPL ALGADVVVYS ATKHIDGQGR CLGGVVLSTQ AFIEEHIQMY LRQTGPSLSP FNAWVLLKGL ETLAVRVRAQ TETAAAIADA LAGHPKIPRL VYPGRADHPQ AATVKKQMGA GSTLIGFEVA GGKAEAFRFL NALKLIRISN NLGDAKSLVT HPATTTHQRL KPEARAELGI SEGFIRYSVG LEHKDDLIED IVAALEKV
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