Gene RPB_0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0706 
Symbol 
ID3908212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp793260 
End bp794381 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content71% 
IMG OID637882598 
Producthypothetical protein 
Protein accessionYP_484328 
Protein GI86747832 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGT TCTGGTCTCG ATATCCTGCA TATCTGCGCC CGCGCCGGCC GCAATGGGGG 
CTGGCGCTGC GCGTCACGAT CGGTGCGCTG CTGGCGCTGG CGGCCGCGCA GGCGCTGCAT
CTGCGGCTGC CGCTGTGGGC GGTGCTGACC GCGATCATCG TCACCCAGCT CAGCGTCGGC
CGCTCGGTCA AGATCGCGTT CGACTATCTG GTCGGCACCA TCGGCGGCGC GATCTATGGC
GGCGCCATCA CCATTCTGGT GCCGCATCAC AGCGAACTGG CGTTGCTCGG GGTGCTGGCG
CTGGCGGTGG CGCCGCTGGC CCTGCTGGCG GCGGTCAAGC CGAGCCTCAA CGTCGCCACC
GTCACGGCGA TCATCGTGCT GCTGGTGCCG ACCATGACGC CGGTGGCGCC GTTGGATTCG
GCGATCGACC GGGTGCTGGA AGTCGCGGTC GGATCGCTGT CCGGGCTGCT GGTGTCGTTC
TTCGTGCTGC CGTCTCGGGC GCAGGCGCTG GCGCTCGCCG CAGCGGCACG GGCGCTCGAT
CTGATGGCGG TGGCGCTCGG CGAATTGCTC GCCGGCCTCA CCCGCGGCCT CGACAACGAT
GCGCTGCACC GGTTGCAGGA CGGCATCGGC GCCTCGCTGG TGACGCTCAA CGAGATCGGC
GACGAGGCCG AGCACGAGCG CGCCACCGGG CTGTCGCGCG GGCCGGATAT CGGGCCGCTG
ATCCGCACGC TGCTCAGGTT GCGGCACGAT CTGGTGATGG TCGGCCGCGC CGTCGCGGCG
CCGCTGCCGC GGGCCTTGCA GGACCGCCTC GGCCCGTCGC TGGAGTCGTT TCGTGCCGCC
GCGACCCTGC ATCTGGCCGC GAGCGCCGCG GCGTTGCGCG ATCGCGGCCC GCCGCCGCCG
CTGCGCGCGG TGATTGCGGC GCTCGACGCC TATGCGGCCG AAATCGCAAA GGTGCGCGGC
GACGGGCTGA CGCGCGAATT CTCCGGCGAG CAGGCCGAGC GGTTCTTCGC GCTCGGCTTC
GCACTGGAAC AGCTCAGCCA GAATTTCCGT GATCTCGAAA TGCGGGTCAC CGAATGGGCC
CGGCCCGGCG CGGCCGTCGC CGACACCCCG CCGGTCTCCT GA
 
Protein sequence
MKPFWSRYPA YLRPRRPQWG LALRVTIGAL LALAAAQALH LRLPLWAVLT AIIVTQLSVG 
RSVKIAFDYL VGTIGGAIYG GAITILVPHH SELALLGVLA LAVAPLALLA AVKPSLNVAT
VTAIIVLLVP TMTPVAPLDS AIDRVLEVAV GSLSGLLVSF FVLPSRAQAL ALAAAARALD
LMAVALGELL AGLTRGLDND ALHRLQDGIG ASLVTLNEIG DEAEHERATG LSRGPDIGPL
IRTLLRLRHD LVMVGRAVAA PLPRALQDRL GPSLESFRAA ATLHLAASAA ALRDRGPPPP
LRAVIAALDA YAAEIAKVRG DGLTREFSGE QAERFFALGF ALEQLSQNFR DLEMRVTEWA
RPGAAVADTP PVS