| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0659 |
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| Symbol | |
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| ID | 3908585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 743528 |
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| End bp | 744142 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882549 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_484281 |
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| Protein GI | 86747785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.265112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCC GCCTGCATCG CGGCGATCTG CCGGATCTCA CCCGCTACAA TGATTCCGTG
GCGATCGACA CCGAGACGAT GGGGCTGCAT CCGCATCGCG ACCGATTGTG CGTGGTGCAA
TTATCGAACG GCGACGGCAG CGCTGACGTG GTGCAGATCC CGCAGGGGCA CAGCGATGCG
CCGAACCTGA AGAAGCTGCT CGGCGACCCG AATATCTTGA AGATCTTCCA CTTCGCGCGG
TTCGATCTCG CCGCGCTCTC CAATGCGCTC GGGGTGATGC CGCAACCGGT GTACTGCACC
AAAATCGCCT CGCGGCTGAC CCGGACCTAC ACCGACCGGC ACGGCCTGAA GGACCTGGTG
CGCGAGCTGC TCAACGTCGA TCTGTCGAAG CAGCAGCAAT CCAGCGACTG GGGCGCCGAC
ACGCTGAGCG ACGCCCAGCT CGCTTACGCC GCCTCCGACG TGCTTCATCT CCACGCGCTG
CGCGACAAGC TCGACGCCAT GCTGGCGCGG GAGAACCGAA CCGAGCTGGC GCAGGCCTGC
TTCGGATTCC TGCCGCACCG CGCCCGACTC GACCTCGGCG GCTGGAGCGA AGAGGACATC
TTCGCGCATT CCTGA
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| Protein sequence | MTIRLHRGDL PDLTRYNDSV AIDTETMGLH PHRDRLCVVQ LSNGDGSADV VQIPQGHSDA
PNLKKLLGDP NILKIFHFAR FDLAALSNAL GVMPQPVYCT KIASRLTRTY TDRHGLKDLV
RELLNVDLSK QQQSSDWGAD TLSDAQLAYA ASDVLHLHAL RDKLDAMLAR ENRTELAQAC
FGFLPHRARL DLGGWSEEDI FAHS
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