Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0625 |
Symbol | |
ID | 3908318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 706206 |
End bp | 707723 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637882514 |
Product | hypothetical protein |
Protein accession | YP_484247 |
Protein GI | 86747751 |
COG category | [R] General function prediction only |
COG ID | [COG0802] Predicted ATPase or kinase [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00759808 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.677515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC CCGCGACATT CTCGGTCGCG CTCGCCAACG AGGCGGCGAC GGCGCGGCTG ATGGCGGACA TCGCGCTGCT GATCGGCCCG GGCGATGTCG TCACGCTGTC GGGCGATCTC GGCGCCGGCA AGACCGCCGC GGCGCGGGCG ATGATCCGCT ATCTGGCCGG CGACGATGAG CTCGAAGTGC CGAGCCCGAC CTTCACGCTG GTGCAGAGCT ACGACCTGCC GCCGTTCCCG CTCCTGCACG CCGATCTGTA TCGCGTCGAG GATCCGTCCG AACTCGAGGA GATCGGTCTG TCGCCGCTGC CGGACGGCAC GGTGGCGCTG ATCGAATGGC CGGAGCGCGC GCCCGGCGCG ATGCCGCCCG ACCGCATCGA CATCGCGCTC AGTCATCGCC CGGCACTCGG CTCGATGGCG CGCGCCGCCG AGATCACCGG CCACGGCAAG GCGGCCGCGC AGGTCGAGCG GCTGGCGGCG CTGCGCAGTT TCATCGAGAC GTCGGGCCAT GCTGACGCCG ATCGCCGCCA CATGCCGGGC GACGCCTCGA CGCGGTCCTA TGCGCGGCTG GTCAAAGACG GCGCCTCGCT GATCCTGATG AACGCGCCGC GGCGGCCCGA CGGGCCCGCT TTGTACGCCG GCAAGAGCTA CAGCGCAGCC GTGCACCTCG CGGAAGACAT CCGGCCGTTC GTCGCGATCG CGAACGGCCT GCGCGCGCAA GGCGTCTCGG CGCCGCAGAT CCATCACGCC GATCTCGATT CCGGATTCCT GATCACCGAG GATTTCGGCA CCGCGGGCTT CGTCGAAGGC TCGCCGCCCG TGCCGATCGT CGAGCGCTAT CAGGCCGCGG CCGACATGCT GGCGGCGCTG CACGGCCAGT CGCTGCCCGA TACGCTGCCG CTGCCGCACG GCGACTACGC GATCCCGGTG TTCGACACCG ACGCGATGCT GATCGAGGTG TCGCTGATGC CGGAATGGTA CCTGCCGGAC CGCGGCGCCC CGCCCTCCGC CGCGCAGCGC GGCGAATTCG TCGCGATGTG GCGGCGCTTG CTCGACGGCA TCGCCGGCGA GACGCGAACC TGGGTGCTGC GCGACTATCA CTCGCCGAAT CTGATCTGGC TCGACGCGCG CAGCGACATC GCCCGCGTCG GCGTGATCGA CTTCCAGGAC ACCGTGCTCG GGCCCGCCGC CTACGACGTG GTGTCGCTGC TGCAGGACGC CCGCGTCGAT GTGCCCGAAG CGCTCGAACT GGCGCTGCTC GGCCGCTACA TCAAGGCCCG GCTCGCCGCC GAACCGGGCT TCGATCCGGC TGCTTTCGCG CGGCTCTATG CGGTGATGTC GGCGCAGCGC AACACAAGGC TGCTCGGCAC CTTCGCGCGG CTCAACCGGC GCGACGGCAA GCCGCAATAT CTGCGCCACC AGCCGCGGAT CTGGACCTAT CTGGCCCGCT CCCTGGCGCA TCCGTCGCTG GCCGAGTTCC GCGCCTGGTA TCAGGCCAAT GTGCCGGCGC CGTTCTGA
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Protein sequence | MSDPATFSVA LANEAATARL MADIALLIGP GDVVTLSGDL GAGKTAAARA MIRYLAGDDE LEVPSPTFTL VQSYDLPPFP LLHADLYRVE DPSELEEIGL SPLPDGTVAL IEWPERAPGA MPPDRIDIAL SHRPALGSMA RAAEITGHGK AAAQVERLAA LRSFIETSGH ADADRRHMPG DASTRSYARL VKDGASLILM NAPRRPDGPA LYAGKSYSAA VHLAEDIRPF VAIANGLRAQ GVSAPQIHHA DLDSGFLITE DFGTAGFVEG SPPVPIVERY QAAADMLAAL HGQSLPDTLP LPHGDYAIPV FDTDAMLIEV SLMPEWYLPD RGAPPSAAQR GEFVAMWRRL LDGIAGETRT WVLRDYHSPN LIWLDARSDI ARVGVIDFQD TVLGPAAYDV VSLLQDARVD VPEALELALL GRYIKARLAA EPGFDPAAFA RLYAVMSAQR NTRLLGTFAR LNRRDGKPQY LRHQPRIWTY LARSLAHPSL AEFRAWYQAN VPAPF
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