Gene RPB_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0625 
Symbol 
ID3908318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp706206 
End bp707723 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content71% 
IMG OID637882514 
Producthypothetical protein 
Protein accessionYP_484247 
Protein GI86747751 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase
[COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00759808 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.677515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CCGCGACATT CTCGGTCGCG CTCGCCAACG AGGCGGCGAC GGCGCGGCTG 
ATGGCGGACA TCGCGCTGCT GATCGGCCCG GGCGATGTCG TCACGCTGTC GGGCGATCTC
GGCGCCGGCA AGACCGCCGC GGCGCGGGCG ATGATCCGCT ATCTGGCCGG CGACGATGAG
CTCGAAGTGC CGAGCCCGAC CTTCACGCTG GTGCAGAGCT ACGACCTGCC GCCGTTCCCG
CTCCTGCACG CCGATCTGTA TCGCGTCGAG GATCCGTCCG AACTCGAGGA GATCGGTCTG
TCGCCGCTGC CGGACGGCAC GGTGGCGCTG ATCGAATGGC CGGAGCGCGC GCCCGGCGCG
ATGCCGCCCG ACCGCATCGA CATCGCGCTC AGTCATCGCC CGGCACTCGG CTCGATGGCG
CGCGCCGCCG AGATCACCGG CCACGGCAAG GCGGCCGCGC AGGTCGAGCG GCTGGCGGCG
CTGCGCAGTT TCATCGAGAC GTCGGGCCAT GCTGACGCCG ATCGCCGCCA CATGCCGGGC
GACGCCTCGA CGCGGTCCTA TGCGCGGCTG GTCAAAGACG GCGCCTCGCT GATCCTGATG
AACGCGCCGC GGCGGCCCGA CGGGCCCGCT TTGTACGCCG GCAAGAGCTA CAGCGCAGCC
GTGCACCTCG CGGAAGACAT CCGGCCGTTC GTCGCGATCG CGAACGGCCT GCGCGCGCAA
GGCGTCTCGG CGCCGCAGAT CCATCACGCC GATCTCGATT CCGGATTCCT GATCACCGAG
GATTTCGGCA CCGCGGGCTT CGTCGAAGGC TCGCCGCCCG TGCCGATCGT CGAGCGCTAT
CAGGCCGCGG CCGACATGCT GGCGGCGCTG CACGGCCAGT CGCTGCCCGA TACGCTGCCG
CTGCCGCACG GCGACTACGC GATCCCGGTG TTCGACACCG ACGCGATGCT GATCGAGGTG
TCGCTGATGC CGGAATGGTA CCTGCCGGAC CGCGGCGCCC CGCCCTCCGC CGCGCAGCGC
GGCGAATTCG TCGCGATGTG GCGGCGCTTG CTCGACGGCA TCGCCGGCGA GACGCGAACC
TGGGTGCTGC GCGACTATCA CTCGCCGAAT CTGATCTGGC TCGACGCGCG CAGCGACATC
GCCCGCGTCG GCGTGATCGA CTTCCAGGAC ACCGTGCTCG GGCCCGCCGC CTACGACGTG
GTGTCGCTGC TGCAGGACGC CCGCGTCGAT GTGCCCGAAG CGCTCGAACT GGCGCTGCTC
GGCCGCTACA TCAAGGCCCG GCTCGCCGCC GAACCGGGCT TCGATCCGGC TGCTTTCGCG
CGGCTCTATG CGGTGATGTC GGCGCAGCGC AACACAAGGC TGCTCGGCAC CTTCGCGCGG
CTCAACCGGC GCGACGGCAA GCCGCAATAT CTGCGCCACC AGCCGCGGAT CTGGACCTAT
CTGGCCCGCT CCCTGGCGCA TCCGTCGCTG GCCGAGTTCC GCGCCTGGTA TCAGGCCAAT
GTGCCGGCGC CGTTCTGA
 
Protein sequence
MSDPATFSVA LANEAATARL MADIALLIGP GDVVTLSGDL GAGKTAAARA MIRYLAGDDE 
LEVPSPTFTL VQSYDLPPFP LLHADLYRVE DPSELEEIGL SPLPDGTVAL IEWPERAPGA
MPPDRIDIAL SHRPALGSMA RAAEITGHGK AAAQVERLAA LRSFIETSGH ADADRRHMPG
DASTRSYARL VKDGASLILM NAPRRPDGPA LYAGKSYSAA VHLAEDIRPF VAIANGLRAQ
GVSAPQIHHA DLDSGFLITE DFGTAGFVEG SPPVPIVERY QAAADMLAAL HGQSLPDTLP
LPHGDYAIPV FDTDAMLIEV SLMPEWYLPD RGAPPSAAQR GEFVAMWRRL LDGIAGETRT
WVLRDYHSPN LIWLDARSDI ARVGVIDFQD TVLGPAAYDV VSLLQDARVD VPEALELALL
GRYIKARLAA EPGFDPAAFA RLYAVMSAQR NTRLLGTFAR LNRRDGKPQY LRHQPRIWTY
LARSLAHPSL AEFRAWYQAN VPAPF