| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0590 |
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| Symbol | |
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| ID | 3908283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 662304 |
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| End bp | 663710 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882479 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_484212 |
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| Protein GI | 86747716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.632056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCGC CGCGCAAGCT GCACATCAAG TCCTATGGCT GCCAGATGAA CGTCTACGAT
GCCCAGCGCA TGGTCGACGT GCTGGCGCCG GAAGGCTTCG TCGAGACCGC GAGCGTGGAC
GACGCCGATC TGGTGATCCT CAACACCTGC CACATCCGCG AAAAGGCCTC CGAGAAGGTG
TTTTCCGAGC TCGGCCGGCT GCGGCTGGCG CGTGACGAGG CGTCGCGCGA TGGCCGGCGG
ATGCAGATCG TCGTCGCCGG CTGCGTCGCC CAGGCCGAGG GCGACGAGAT CGTCCGCCGC
CAGCCCGCCG TCGATGTCGT GGTCGGCCCG CAGAGCTATC ACCATCTGCC GCGCCTATTG
GCGCAGGCGG CGCAGACCGG CCGGGCGCTG GAGACCGAGT TCCCGATCGC CGACAAATTC
GGCTTCCTGC CGCAGCCGCA GCCCGAGGCG ATCCGGGCGC GCGGCATCTC GGCTTTCGTC
ACCGTGCAGG AAGGCTGCGA CAAGTTCTGC ACCTTCTGCG TGGTGCCTTA TACCCGCGGC
GCCGAGGTCT CGCGCCCGGT GGCGGCGATC CTCGCCGACG TCGAACGGCT CGCCGACCAC
GGCGTCCGCG AGCTCACCCT GATCGGCCAG AACGTCAACG CCTATCACGG CGACGGGCCG
GACGGCCGGC CCTGGACGCT CGGCCGCCTG CTGCAGCGGC TGGCCGCGGT TCCCGGCATC
GTCCGGCTGC GCTATTCGAC CAGCCATCCC AACGACGTCG ACGACGACCT GATCGCGGCG
CATCGCGACC TCGACGCGCT GATGCCGTTC GTGCATCTGC CGGTGCAGTC GGGCTCGGAC
CGGATTCTGG CGGCGATGAA CCGCAAGCAT ACGGCTGCGG ATTATCGCCG GGTGATCGAC
CGGTTCCGCG CGGTGCGGCC GGAGATCGCG TTTTCGTCGG ATTTCATCGT CGGATTCCCC
GGCGAGACCG ATGCCGATTT CGAAGCGACG CTCGCACTGG TCACACAAAT CGGCTACGCT
GGTGCGTATT CGTTCAAATA TTCGCCGCGG CCCGGCACGC CCGCGGCGGA GATGCCGGAG
ATGGTGCCCG CAGCGGTGAT GGACGAACGT TTGGAGCGGC TTCAGCAAGT GATCGACGCT
CAGCAATCGG CCTTCAACAG GGCCGCGATC GGCCGGACCG TCGACGTGCT GTTCGAGCGC
GCCGGGCGCA AGCCGGGCCA GATCGTCGGC CGCACCGCCT ATCTGCAGCC CGCCCACGTG
TTCCCACCCG CCGGGATGGC GCCCGACAGT CTCGTCGGGC AGATCCTCCC GGTCCGGGTC
GACAGCCTCG AGCGTTACAG CCTGCTCGGC GAACTGGCGG CCACGCCGCC GCGGCATGCT
CGTCCTCTGG CCGCCACAGG AGCCTGA
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| Protein sequence | MAPPRKLHIK SYGCQMNVYD AQRMVDVLAP EGFVETASVD DADLVILNTC HIREKASEKV
FSELGRLRLA RDEASRDGRR MQIVVAGCVA QAEGDEIVRR QPAVDVVVGP QSYHHLPRLL
AQAAQTGRAL ETEFPIADKF GFLPQPQPEA IRARGISAFV TVQEGCDKFC TFCVVPYTRG
AEVSRPVAAI LADVERLADH GVRELTLIGQ NVNAYHGDGP DGRPWTLGRL LQRLAAVPGI
VRLRYSTSHP NDVDDDLIAA HRDLDALMPF VHLPVQSGSD RILAAMNRKH TAADYRRVID
RFRAVRPEIA FSSDFIVGFP GETDADFEAT LALVTQIGYA GAYSFKYSPR PGTPAAEMPE
MVPAAVMDER LERLQQVIDA QQSAFNRAAI GRTVDVLFER AGRKPGQIVG RTAYLQPAHV
FPPAGMAPDS LVGQILPVRV DSLERYSLLG ELAATPPRHA RPLAATGA
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