Gene RPB_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0582 
Symbol 
ID3908275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp655394 
End bp656950 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content73% 
IMG OID637882471 
Productintegral membrane protein MviN 
Protein accessionYP_484204 
Protein GI86747708 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0591354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC CGATTCTCAC CGTCTCCGCC GGCACGCTGA CGTCCCGCCT GCTCGGATTC 
GTGCGCGACG CGCTGGTCGC GGCGCTGCTC GGCGCCGGCG CGGTGGCGGA CGCGTTTCTG
CTGGCGTTCC AGCTCGTCAA TGTGGCGCGG CGGCTGCTGA CCGAAGGCGC GCTGAATGCG
GCGCTGGTGC CGGCGTGGCT GCGGGTCCGC GAGCACAACG GCCCGGTCGC CGCCGCCGCC
TTCGCCGGCC GGCTGCTCGG CACCGTGGCG CTGGCGACGC TCGTGCTGGC GCTGCTGCTC
GGCGTGTTCA TGCCGCTGTT GATCGCGCTC TTGGCGCCGG GCTTTCTCGG CCATCCGACG
CTCGCGATGG CGGTGCGCGA TGCCCGGCTG ATGCTGCCTT ATCTGGCCTT CGCCGGCCCG
GTCGCGGTGA TGATGGGGCT GTTCAACGCG AACGGCAAAG TCGGCCTCAC CGCGTTCTCG
CCGCTGCTGT TCAACATCTT GCTGATCACC GTCACCGGCG CGCTGTTGCT GTGGCACGCC
GACGAGACCC GCGCCGCGCT GATCCTGTCC GCCACCGTCG GCATCGCCGG GCTGCTGCAA
CTCGGCATCC TCGTGTTCAA CGGCCGCGGC GAGCGCCTGG CGACGCCGCT GCGGGTGTCG
TTCGACACCG CGACGCGCGC CTTCTTCGCC AAGGCGATCC CCGGCATGAT CGCCAATTCC
GGGCCGCAAT TGCTGATCGT GATCGGCGCG GTCGTGGCGT CGGGGATGCC TTCCGCGGTG
TCGTGGCTGT ATTTCGCCAA CCGGCTGATC GAGCTGCCGC TCGGCATCGT CGGCGTGGCG
ATGGGCGCGG TGCTGGTGCC GGAACTGGCG CGCGCGGTGC GCGGCGACGA CCGTGCCGCC
TTGTCGGACG CCGCCTCGCG CGGGCTGGAG CTCGCGCTCG GCGTGGCGTT GCCGGCGACG
CTGGGGCTGA TCGTGCTGAG CGGGCCGATC GTGCGGGTAC TGTTCGAGCA CGGCGCGTTC
GGCGCCGCCG ACACCGCCGC GACCGCGCAG GCGCTGGCTC TGCTGGCGCT CGGGCTGCCG
GCGCAGGTGC TGGCGAAGAA CTGGTCGGCG GCGTTCTTCG CCCGCGAGGA CACGCGCACG
CCGCTGCTCG CCACGCTGCT CGCTTTGGCC GTGGCGCTCG CCGCCGCGCT GCTGCTCGGG
CGGCTATTCG GCGCCGCCGG CGTCGCCGTC GCGATCGCGC TCGGCGCCTG GAGCAACGCA
GCCCTGCTGC TGGGACGCGG CCTGAGCCGC TTCGGCGTTA CGGTCGATCC GGTGGCGCGG
CGCCGCGTCG CGCTGATCGT GCTCGCGGCC GGCGTGATGG GCGGGCTGCT GGCGCTGAAG
GCGGCCTTCG TGCTGCCGCT GGTCGCGCAG GCCTCGACGC TGGTGCAGGC GGCGGTGCTC
GGCGTCCTGA TCGCCGGCGC TCTGATCATC TACGCCGCGC TGCTGATGCT GTTCGGCGTG
GTGCGCCCCG CAGCGGCGCT CGGGGCGCTG CGGCGGCCGC GCGGCTTGCG CGGCTAG
 
Protein sequence
MIRPILTVSA GTLTSRLLGF VRDALVAALL GAGAVADAFL LAFQLVNVAR RLLTEGALNA 
ALVPAWLRVR EHNGPVAAAA FAGRLLGTVA LATLVLALLL GVFMPLLIAL LAPGFLGHPT
LAMAVRDARL MLPYLAFAGP VAVMMGLFNA NGKVGLTAFS PLLFNILLIT VTGALLLWHA
DETRAALILS ATVGIAGLLQ LGILVFNGRG ERLATPLRVS FDTATRAFFA KAIPGMIANS
GPQLLIVIGA VVASGMPSAV SWLYFANRLI ELPLGIVGVA MGAVLVPELA RAVRGDDRAA
LSDAASRGLE LALGVALPAT LGLIVLSGPI VRVLFEHGAF GAADTAATAQ ALALLALGLP
AQVLAKNWSA AFFAREDTRT PLLATLLALA VALAAALLLG RLFGAAGVAV AIALGAWSNA
ALLLGRGLSR FGVTVDPVAR RRVALIVLAA GVMGGLLALK AAFVLPLVAQ ASTLVQAAVL
GVLIAGALII YAALLMLFGV VRPAAALGAL RRPRGLRG