Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0580 |
Symbol | |
ID | 3908273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 652169 |
End bp | 653899 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882469 |
Product | AMP-binding domain protein |
Protein accession | YP_484202 |
Protein GI | 86747706 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.566618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.942666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACGGCG AGGAAACCAA GGACGTGATC GACAAAGCTC CCGATAAAGC TCCCAGCTAT GTCTGCGGCG TCTCCGACGC GCCGCTGCTC GGCATCACCA TCGGGCAGGC GCTGGATCTG GCGGCGCAGC GTTGGCCGGA CCGCGAGGCG CTGGTGTCGC CGAGCCACGA CGTGCGCTGG AGCTGGCGCG AGTTCGCGCA ACGCGTCGAT GCGCTGGCGG CGGGCTTCCT GGCGCTCGGG CTGGAGCGCG GCGCGCGCAT CGGCGTGTGG TCGATGAACC GGCCGGAATG GACGCTGACG CAATTCGCCG CCGCCAAGGC CGGCATGATC CTCGTCACCA TCAATCCGGC CTATCGGCTG AGCGAGCTCG AATTCGCCCT CGCCAAGGTC GGCTGCGCCG CCTTGGTCAC CGCCACCGCG TTCAAGACCT CGGCCTATAT GGAGATGCTG AATACGCTGA TCCCGGAGCT TGCGAAATCG CAGCCCGGCG CGCTGCAGTC GGCCAGGCTG CCGCAGTTGC GCGCGGTGAT CCAGATCGGC GGCCCGAAAT GCCCGGGCAC GCTCGCCTTC GACGAGGTCG CCACGATGGG CGGCGACCGG CATCGCCAGG CGATCGCGCA GCTCGCCGCC GAATTGCAGT TCGACGACGC CGTCAACATC CAGTTCACCA GCGGCACCAC CGGCTCGCCC AAGGGCGTGA CGCTGACGCA TCACAACATC CTCAATAATG GTTACTTCGT CGGCCGCGCC ATGAAGCTGA CCGAGCAGGA CCGGATTTGC ATTCCGGTGC CGCTGTATCA TTGCTTCGGC ATGGTGATGG GCAATCTCGC CTCGGTCACC TGTGGCGCCG CCATGGTGTA TCCCGGCGAG GGTTTTGACC CGCTGGCGAC GCTGCAGACC GCGTCGTCGG AGAAATGCAC CGCGCTGTAC GGCGTGCCGA CGATGTTCAT CGCCGAACTC GATCATCCGG ACTTCGCCAG CTTCGATCTG TCGTCGCTGC GCACCGGCAT CATGGCGGGC GCGCCGTGCC CGGTCGAAGT GATGCGCCGC GTCAACGACC AGATGAACAT GCGCGAGGTG ACGATCGCCT ACGGCATGAC CGAGACCAGC CCGGTCAGTT TCCAGAGCGC GGTCGACGAT CCGGAGGAAC GTCGCGTCTC CACCGTCGGC CGCATCCATC CGCATGTCGA GGTCAAGGTG GTCGATCTCG AAGGCCGCAT CGTGCCGCGC GGGGTGCGCG GCGAACTCTG CACCCGCGGC TACAGCATCA TGCTCGGCTA TTGGGACGAG GCGGAGAAGA CCGCCGACGT GCTCGACGCC GCCGGCTGGA TGCACACCGG CGATCTCGCG GTGATCGACG ACGAAGGCTT CTGCAACATC GTCGGCCGCA TCAAGGACAT GGTGATCCGC GGCGGCGAGA ATCTGTATCC GCGCGAGATC GAGGAATTCC TGTATCGCCA TCCCAAGATC CAGGACGTGC AGATCTTCGG CGTCGCCGAC AGTCGCTACG GCGAGGAGCT GTGCGCCTGG GTCCGCGTCC GTCCCGGCGA GACGCTGACC GCCGACGACA TCCGCGGCTT CTGCCAGGGC CAGATCGCCC ACAACAAGAT CCCGCGCTAC GTCGAATTCG TCGACGAATT CCCGATGACC GTCACCGGCA AGATCCAGAA ATTCGTGATG CGCGAGAAGG TCGAGGCCAA GCTCGGACTG AAGGCGGCGA AGACGGCGTG A
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Protein sequence | MHGEETKDVI DKAPDKAPSY VCGVSDAPLL GITIGQALDL AAQRWPDREA LVSPSHDVRW SWREFAQRVD ALAAGFLALG LERGARIGVW SMNRPEWTLT QFAAAKAGMI LVTINPAYRL SELEFALAKV GCAALVTATA FKTSAYMEML NTLIPELAKS QPGALQSARL PQLRAVIQIG GPKCPGTLAF DEVATMGGDR HRQAIAQLAA ELQFDDAVNI QFTSGTTGSP KGVTLTHHNI LNNGYFVGRA MKLTEQDRIC IPVPLYHCFG MVMGNLASVT CGAAMVYPGE GFDPLATLQT ASSEKCTALY GVPTMFIAEL DHPDFASFDL SSLRTGIMAG APCPVEVMRR VNDQMNMREV TIAYGMTETS PVSFQSAVDD PEERRVSTVG RIHPHVEVKV VDLEGRIVPR GVRGELCTRG YSIMLGYWDE AEKTADVLDA AGWMHTGDLA VIDDEGFCNI VGRIKDMVIR GGENLYPREI EEFLYRHPKI QDVQIFGVAD SRYGEELCAW VRVRPGETLT ADDIRGFCQG QIAHNKIPRY VEFVDEFPMT VTGKIQKFVM REKVEAKLGL KAAKTA
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