Gene RPB_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0577 
Symbol 
ID3908270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp648576 
End bp650069 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content67% 
IMG OID637882466 
Productsuccinic semialdehyde dehydrogenase 
Protein accessionYP_484199 
Protein GI86747703 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01780] succinate-semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.289417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.367457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCAA CTGCCGCCGC CCGCCCGTCC GATGCCGCCT CGTCGCTGCG CGACCGCCTG 
AAAGATCCGT CGCTGCTGCG CGAACAGTGC TTCATCGACG GCGCCTGGAC CGGGACGGCG
GAGATCGCCG TGACCAATCC GGCGAATCGC CAGGAACTCG GCAAGATCCC GGATCTGGGC
GCCGCCGGGG CGACCGCCGC GGTCGAGGCC GCCGAGCGGG CGTTTCCGGC CTGGGCCAAG
CTGACCGCCA AGCAGCGCTC CAACATCATG CGCAAATGGT TCGAGCTGAT CGTCGCCAAC
CGCGAGGATC TGGCGCTGAT CCTTACCTCC GAACAGGGCA AGCCGCTGAC CGAAGCGCTC
GGCGAGGTCG ATATCGGCGC CGCCTATGTG GAGTTCTTCG CCGAGGAAGC CCGACGGGTC
TATGGCGAAA CCATTCCGAC GCAGCGCGCC GATGCCCGGC TGATCGCCAT CAAGCAGCCG
ATCGGCGTCT GCGCGGCGAT CACGCCGTGG AATTTTCCGA ACTCGATGAT CACCCGCAAG
GTGTCGCCGG CGCTGGCCGC GGGCTGCACC GTGGTGCTGA AGCCGGCCGA AGAGACGCCG
TTCTCGGCGC TGGCGCTGGC GGTGCTGGCC GAGAAGGCCG GCGTGCCGAA AGGCGTGTTC
AACATCGTCA CCGGCGACGC GCCGCCGATC GGCCAAGTGT TCTGCGAACA TCCGGCGGTG
CGCTTCGTCG GCTTCACCGG CTCCACCGAA GTCGGCAAGA TCCTGTACCG GCAGTCCGCC
GTGGGCGTGA AGAAGCTCGG TCTGGAGCTC GGCGGTAACG CTCCGTTCAT CGTGTTCGAC
GATGCCGACA TCGACGCCGC GGTCGACGGC GCGATGGTGT CGAAATATCG CAACATGGGC
CAGACCTGCG TCTGCGCCAA CCGGCTCTAT GTGCAGGACG GCGTCTACGA TGCCTTCGTC
GAGAAGCTCG CCGCCAAGGT CAAGGCGATG ACGGTCGGCG ACGGCACCGA GCCGGGCGTC
ACCCAGGGCC CGCTGATCAA CGAAGCCGCG GTCGAGAAGA CCGAGAAGCA CATCGCCGAT
GCGGTGTCGA ACGGCGCGAA GGTGATCACC GGCGGCAAGC GCCACGCGCT CGGCGGCACC
TTCTTCGAGC CCACCGTGCT GGCCGATGTG CGCCCCGACG CGCTGGTCGC CCATGAGGAG
ACGTTCGGCC CGCTGGCCCC GGTGTTCCGC TTCAAGGACG AAGCCGAAGT GATCAAGCTC
GCCAACGCCT CGCCGTTCGG CCTCGCCAGT TACTTCTACG CCCGCGATCT CGGCCGGGTC
TGGCGCGTCG CCGAGGCGCT GGAGTCGGGC ATGGTCGGCG TCAATTCCGG CCTGATCACC
ACCGAAGTCG CGCCCTTCGG CGGCGTCAAG GAATCGGGGC TGGGCCGCGA AGGCTCGCAT
CACGGCATGG ACGAATATGT CGAGATCAAA TACGTGATGA TGGCGGGGAT CTGA
 
Protein sequence
MSPTAAARPS DAASSLRDRL KDPSLLREQC FIDGAWTGTA EIAVTNPANR QELGKIPDLG 
AAGATAAVEA AERAFPAWAK LTAKQRSNIM RKWFELIVAN REDLALILTS EQGKPLTEAL
GEVDIGAAYV EFFAEEARRV YGETIPTQRA DARLIAIKQP IGVCAAITPW NFPNSMITRK
VSPALAAGCT VVLKPAEETP FSALALAVLA EKAGVPKGVF NIVTGDAPPI GQVFCEHPAV
RFVGFTGSTE VGKILYRQSA VGVKKLGLEL GGNAPFIVFD DADIDAAVDG AMVSKYRNMG
QTCVCANRLY VQDGVYDAFV EKLAAKVKAM TVGDGTEPGV TQGPLINEAA VEKTEKHIAD
AVSNGAKVIT GGKRHALGGT FFEPTVLADV RPDALVAHEE TFGPLAPVFR FKDEAEVIKL
ANASPFGLAS YFYARDLGRV WRVAEALESG MVGVNSGLIT TEVAPFGGVK ESGLGREGSH
HGMDEYVEIK YVMMAGI