| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0551 |
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| Symbol | |
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| ID | 3909590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 620124 |
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| End bp | 621413 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882439 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_484173 |
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| Protein GI | 86747677 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0207185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0758016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTATA TTTGGCACAT TACAAACTCG GCACGCGGTT TTGCGGCCGG GAAGGGATCC
CGTCAAAAAC AACGAACAGG GGCGTGGCGG TTCCACGCGC AGGCTGTGTC ACAGAAAACG
CGTAAAATGA GTGTCTCGTC CAAGGGTGCC AAGCGTGGCG CTGCGGCCGG CCGCAGCGCG
ACCAACCGAT CCAGTATGTC TGCCAAGGAC ACCCGGACCG TCAAGTCCCC TGCTTCGAAG
GCTGTTGCTG CCAAGACCAC GGCTCCCAAA GCCACTGCGT CCAAGACCGC TGCGTCCAAG
GCCACCGTGT CCAAAACCAA GGCCTCTGTT TCACAGGCCT CCGTTTCCAA GGCCTCGAGT
TCGAAGGCCG CCGCTGCCAA GGCGAGCGCC GCCAAAGCGA CTGCGAAGAC GACCACCGCA
AAGGGTTCCG CTGCGAGGGC TTCGGCTCCC AAGGCGGCGG CTCTCAAGTC CTCGAAAAAC
AAAAGAAGTG CAATGCCATC CAAGACTGCG AAAACTGCCG CCGCGGCGCC CGCTTCCAAG
GCGGCTCCGG CCAAGTCGAC CGCCAAGCCC GCTGCCGCCA AGGCTCCGGT AGCGCCGCCG
CGCGCCGCCC CGCCGAAGGC TGCCGCGAAG CCCGAGGTCA AGCCGGTGGC CGTCAAGCCG
GCCGCGCCGC CCAAGGTCGA GGAGCCCAAG AAGGTCGTGA CCCAGCGTCA GGGCTTCAAG
GCCAGCGAGT TCGTGGTCTA TCCGGCGCAT GGCGTCGGCC AGATCCTGGC GATCGAGGAA
CAGGAAATCG CGGGCGCCAA GCTCGAACTG TTCGTCATCA ACTTCATCAA GGACAAGATG
ACGCTGCGGG TGCCGACCGC CAAGGTCGCC AATGTCGGGA TGCGCAAGCT GTCCGACCCG
GCGCTGGTGA AGAAGGCGCT GGAGACGCTC AAGGGCCGCG CCCGCGTCAA GCGCACGATG
TGGTCGCGCC GCGCCCAGGA ATACGAAGCC AAGATCAATT CGGGCGACAT CGTCGCGATC
GCCGAAGTGG TCCGCGACCT GTTCCGCTCG GACTCGCAGC CCGAGCAGTC CTACAGCGAA
CGCCAGCTCT ATGAAGCGGC GCTCGACCGG CTGTCGCGCG AAATCGCGGT GGTGCAGCAG
GTCACCGAGA CCGAAGCCGT CAAGGAAGTC GAAGGCCAGC TCGCCAAGAG CCCGCGCCGC
GGCGCCAAGG CCGAGGCGGA CGCCGAAGGC GATGCCGAAG GTGATCTCGA CGGCGACACC
GACGACGCGG TGACCGACGA AGCCGCCTGA
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| Protein sequence | MCYIWHITNS ARGFAAGKGS RQKQRTGAWR FHAQAVSQKT RKMSVSSKGA KRGAAAGRSA
TNRSSMSAKD TRTVKSPASK AVAAKTTAPK ATASKTAASK ATVSKTKASV SQASVSKASS
SKAAAAKASA AKATAKTTTA KGSAARASAP KAAALKSSKN KRSAMPSKTA KTAAAAPASK
AAPAKSTAKP AAAKAPVAPP RAAPPKAAAK PEVKPVAVKP AAPPKVEEPK KVVTQRQGFK
ASEFVVYPAH GVGQILAIEE QEIAGAKLEL FVINFIKDKM TLRVPTAKVA NVGMRKLSDP
ALVKKALETL KGRARVKRTM WSRRAQEYEA KINSGDIVAI AEVVRDLFRS DSQPEQSYSE
RQLYEAALDR LSREIAVVQQ VTETEAVKEV EGQLAKSPRR GAKAEADAEG DAEGDLDGDT
DDAVTDEAA
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