| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0455 |
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| Symbol | |
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| ID | 3909800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 502023 |
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| End bp | 502922 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882342 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_484077 |
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| Protein GI | 86747581 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.676672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.248951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTG CAGCTACGCT ACCCGTTCTC AACGGTGAAT CCGGACTCGC TCGGTATCTC
GCGGAAATCC GCAAGTTCCC GATGCTCGAG CCGCAACAGG AATACATGTT CGCCAAGCGC
TGGCGCGAGC ACGATGATCG CGACGCCGCG CATCACCTCG TCACCAGCCA TCTGCGGCTC
GTCGCCAAGA TCGCCATGGG CTATCGCGGC TACGGCCTGC CGATCTCCGA GGTCGTCTCG
GAAGGCAATG TCGGCCTGAT GCAGGCGGTG AAGCGGTTCG AGCCGGACAA AGGCTTCCGC
CTCGCCACCT ACGCGATGTG GTGGATCAAG GCGTCGATTC AAGAATACAT CCTGCGTTCG
TGGTCGCTCG TGAAGATGGG CACCACCGCG AACCAGAAGA AGCTGTTCTT CAATCTGCGC
AAGGCGAAGA GCAAGATCTC GGCGCTGGAC GAGGGTGATA TGCACCCCGA CCAGGTCAAG
CTGATCGCCA AGCGGCTCGG CGTCACCGAG CAGGACGTGA TCGACATGAA TCGCCGCCTC
GGTGGCGACG CGTCGCTCAA CGCCCCGATC CGCGACGACG GCGAGCCCGG CGAATGGCAG
GACTGGCTGG TCGACCAGTC GCCGAATCAG GAAGCCGTGA TGGCCGAGCA CGAGGAGCTC
GATCATCGCC GCGCCGCGCT GAACGGTGCG ATCGGCGTGC TCAACCCGCG CGAACGGCGG
ATCTTCGAGG CGCGCCGCCT CGCCGACGAG CCGATGACGC TGGAAGACCT CGCCGCCGAG
TTCGGCGTCT CGCGCGAGCG CGTCCGCCAG ATCGAGGTGC GTGCCTTCGA GAAGGTGCAG
AGCGCCGTCA AGGGCACCAT CGCGCGTCAG GAACAGGCGG CGCTCGAAGC CGCCCACTGA
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| Protein sequence | MARAATLPVL NGESGLARYL AEIRKFPMLE PQQEYMFAKR WREHDDRDAA HHLVTSHLRL
VAKIAMGYRG YGLPISEVVS EGNVGLMQAV KRFEPDKGFR LATYAMWWIK ASIQEYILRS
WSLVKMGTTA NQKKLFFNLR KAKSKISALD EGDMHPDQVK LIAKRLGVTE QDVIDMNRRL
GGDASLNAPI RDDGEPGEWQ DWLVDQSPNQ EAVMAEHEEL DHRRAALNGA IGVLNPRERR
IFEARRLADE PMTLEDLAAE FGVSRERVRQ IEVRAFEKVQ SAVKGTIARQ EQAALEAAH
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