Gene RPB_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0449 
Symbol 
ID3910005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp495145 
End bp495615 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content71% 
IMG OID637882335 
ProductAsnC family transcriptional regulator 
Protein accessionYP_484071 
Protein GI86747575 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.937702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG ACGCGATCGA CCTCAAGATC CTGGCCGAGC TGCAGGCCGA CGCCCGGATT 
CCGAACCTCA CGCTGGCCGA GCGGGTCGGG CTGTCGCCGT CGCCCTGTTC GCGGCGGGTC
CGGCTGCTGG AACAGGCGGG CGTGGTGGCG GGCTATCGGG CGCTGATCGA TCGCGCCGCG
GTCGGGCTGT CGGTCACCGC CTTCGCGGGC ATCCGGGTCG AGCGGCATTC GCGCGACAAT
GCCGAGGCGT TCATCGCCGC GGTGCGCGAC ATGCCGGAGG TCATCGCCTG CCATCTGGTC
TCGGGCGACG CCGATTTCCT GCTCGAAGTG GTGGTGCCGG ATATCGCCGC CTACGAGGCC
ACCGTGCTGC GCGGCCTGCT GGCGCTGCCG ACGGTGCGCG ACATCCGCAC CTCGTTCGCG
ATGCGCAGCG ACAAGCTCGA CGGCCCGCTG CCGCTGCCGA AGCCGGCGTA G
 
Protein sequence
MSLDAIDLKI LAELQADARI PNLTLAERVG LSPSPCSRRV RLLEQAGVVA GYRALIDRAA 
VGLSVTAFAG IRVERHSRDN AEAFIAAVRD MPEVIACHLV SGDADFLLEV VVPDIAAYEA
TVLRGLLALP TVRDIRTSFA MRSDKLDGPL PLPKPA