Gene RPB_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0425 
Symbolrph 
ID3909981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp467984 
End bp468697 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID637882311 
Productribonuclease PH 
Protein accessionYP_484047 
Protein GI86747551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCAA GCCGCCGTGC GCCCGACGAA CTGCGCGCCG TCTCGCTGGA GCGGGGCGTC 
GTGAAATACG CCGAGGGCTC CTGCCTGGTT AAATTCGGCG ACACCCATGT GCTGGTGACG
GCGACCCTGG AGGAGCGGCT GCCGCCGTGG CTGAAGGGCC AGGGCCGTGG CTGGGTGACG
GCCGAATACG GCATGCTGCC CCGCGCCACG CTGGAACGCA CCCGGCGCGA GGCCGCAGCC
GGCAAGCAGA ATGGCCGCAC CGTCGAGATC CAGCGCCTGA TCGGCCGCTC GCTGCGCACC
ATCGTCGACC TGCAGGCGCT CGGCGAGCGC CAGATCACGG TCGATTGCGA CGTGCTGCAG
GCCGATGGCG GCACCCGGAC TGCCTCGATC ACCGGCGCCT GGGTGGCGCT GGCCGACTGT
CTCGCCTGGA TGAAGACCCG CAACATGCTC AAAGGCCAGG TGATGCGCGA CAACGTCGCA
GCGATCTCCT GCGGAATCTA CAACGGCACC CCGGTGCTCG ACCTCGACTA CGCCGAGGAC
TCCGAAGCCG AAACCGACGC CAATTTCGTC ATGACCGGCG ACGGCCGGAT CGTCGAGGTG
CAGGGCACTG CCGAGAAGAC GCCGTTCTCG CAGGACGAGT TCCTGGCGCT GATGGCGCTG
GCGCAGAAGG GCGTGGCGCG GCTGGTCGAT CTGCAGAAAA TGGCGGTGGC GTGA
 
Protein sequence
MRPSRRAPDE LRAVSLERGV VKYAEGSCLV KFGDTHVLVT ATLEERLPPW LKGQGRGWVT 
AEYGMLPRAT LERTRREAAA GKQNGRTVEI QRLIGRSLRT IVDLQALGER QITVDCDVLQ
ADGGTRTASI TGAWVALADC LAWMKTRNML KGQVMRDNVA AISCGIYNGT PVLDLDYAED
SEAETDANFV MTGDGRIVEV QGTAEKTPFS QDEFLALMAL AQKGVARLVD LQKMAVA