Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0425 |
Symbol | rph |
ID | 3909981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 467984 |
End bp | 468697 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882311 |
Product | ribonuclease PH |
Protein accession | YP_484047 |
Protein GI | 86747551 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCAA GCCGCCGTGC GCCCGACGAA CTGCGCGCCG TCTCGCTGGA GCGGGGCGTC GTGAAATACG CCGAGGGCTC CTGCCTGGTT AAATTCGGCG ACACCCATGT GCTGGTGACG GCGACCCTGG AGGAGCGGCT GCCGCCGTGG CTGAAGGGCC AGGGCCGTGG CTGGGTGACG GCCGAATACG GCATGCTGCC CCGCGCCACG CTGGAACGCA CCCGGCGCGA GGCCGCAGCC GGCAAGCAGA ATGGCCGCAC CGTCGAGATC CAGCGCCTGA TCGGCCGCTC GCTGCGCACC ATCGTCGACC TGCAGGCGCT CGGCGAGCGC CAGATCACGG TCGATTGCGA CGTGCTGCAG GCCGATGGCG GCACCCGGAC TGCCTCGATC ACCGGCGCCT GGGTGGCGCT GGCCGACTGT CTCGCCTGGA TGAAGACCCG CAACATGCTC AAAGGCCAGG TGATGCGCGA CAACGTCGCA GCGATCTCCT GCGGAATCTA CAACGGCACC CCGGTGCTCG ACCTCGACTA CGCCGAGGAC TCCGAAGCCG AAACCGACGC CAATTTCGTC ATGACCGGCG ACGGCCGGAT CGTCGAGGTG CAGGGCACTG CCGAGAAGAC GCCGTTCTCG CAGGACGAGT TCCTGGCGCT GATGGCGCTG GCGCAGAAGG GCGTGGCGCG GCTGGTCGAT CTGCAGAAAA TGGCGGTGGC GTGA
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Protein sequence | MRPSRRAPDE LRAVSLERGV VKYAEGSCLV KFGDTHVLVT ATLEERLPPW LKGQGRGWVT AEYGMLPRAT LERTRREAAA GKQNGRTVEI QRLIGRSLRT IVDLQALGER QITVDCDVLQ ADGGTRTASI TGAWVALADC LAWMKTRNML KGQVMRDNVA AISCGIYNGT PVLDLDYAED SEAETDANFV MTGDGRIVEV QGTAEKTPFS QDEFLALMAL AQKGVARLVD LQKMAVA
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