| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0423 |
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| Symbol | |
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| ID | 3909979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 466138 |
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| End bp | 467310 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637882309 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_484045 |
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| Protein GI | 86747549 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCGCTG AATCCGATCG CGCCTTCGGC GTCCAAGCCT TTGGTGTCTA CGTGCACTGG
CCCTTCTGCC TGTCGAAGTG CCCGTATTGC GACTTCAACA GCCATGTCCG GCACGCCGCG
ATCGACGAGG ACCGCTTCGC TCGCGCCTTC GCCCGCGAGA TCGAAGCCAC CGCGCAGCGG
ATCGGTCCGC GGGACGTCAC GTCGATCTTT CTCGGCGGCG GCACGCCGTC GCTGATGCAG
CCGCAGACCG TCGGCGCCAT CCTCGACGCC ATCGGCAAAT ACTGGCGCGT CGCGCCCGAT
GTCGAAGTGA GCCTCGAAGC CAATCCGACC AGCGTCGAGG CGACGCGGTT TCGCGGCTAT
CGCGCGGCCG GCGTCAACCG CGTCTCGCTC GGCGTGCAGG CGCTCGACGA CGCCTCGCTG
AAGACGCTCG GCCGCCTGCA CACGGCACAG GAAGCAATGG AAGCCGTGGC GATCGCGCGC
GCGGCGTTCG ATCGCTATTC GTTCGACCTG ATCTACGCGC GCCCGGGGCA AACTCCCGCG
ATGTGGGAGG CCGAACTGCG CCGCGCCATC GGCGAGGCGG CCGAACATCT GTCGCTGTAT
CAGCTCACGA TCGAGGCCGA GACGCCGTTC TTTGCGCTGC ATCGCGCCGG CAAGCTGCAG
ACGCCGGACG AGTCCGCGTC GCGCGCACTC TACGATGTCA CACAATCGGT CTGCGCCGAG
CTCGGACTCC CCGCTTACGA GATTTCCAAT CACGCCCGCC CGGGTGCCGA GTGCAAACAC
AATCTCGTCT ACTGGCGCGG TCAGGAATAT GCCGGGATCG GCCCCGGCGC GCATGGCCGG
CTCGACATCG GCGGCACGCG CTACGCGATC GCCACCGAAA AGCGGCCGGA GAGCTGGCTG
ATGCGGGTCG AAGCGAGCGG CACCGGCGTG GTGACCGATG ACCGTCTCAA CAGCGAAGAG
CGCGCCGACG AATTCCTGCT GATGGGGCTG CGGCTCGCCG AAGGCATCGA CCCGCGGCGC
TATCAGGCGC TGGCCGGCCG TTCGCTCGAT CCATCGCGGA TCGCGATCCT GCGCGAGGAA
GGCGCCATCG CGGTCGACGC CGACGGAAGG CTGCGCGTGA CGCAAGCCGG CTTTCCGGTG
CTGGATGCCG TCGTGGCGGA TCTGGCGGCG TAG
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| Protein sequence | MGAESDRAFG VQAFGVYVHW PFCLSKCPYC DFNSHVRHAA IDEDRFARAF AREIEATAQR
IGPRDVTSIF LGGGTPSLMQ PQTVGAILDA IGKYWRVAPD VEVSLEANPT SVEATRFRGY
RAAGVNRVSL GVQALDDASL KTLGRLHTAQ EAMEAVAIAR AAFDRYSFDL IYARPGQTPA
MWEAELRRAI GEAAEHLSLY QLTIEAETPF FALHRAGKLQ TPDESASRAL YDVTQSVCAE
LGLPAYEISN HARPGAECKH NLVYWRGQEY AGIGPGAHGR LDIGGTRYAI ATEKRPESWL
MRVEASGTGV VTDDRLNSEE RADEFLLMGL RLAEGIDPRR YQALAGRSLD PSRIAILREE
GAIAVDADGR LRVTQAGFPV LDAVVADLAA
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