| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0393 |
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| Symbol | rho |
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| ID | 3908831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 438366 |
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| End bp | 439631 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637882279 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_484015 |
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| Protein GI | 86747519 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.557794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGAAA TGAAACTTTC AGACCTCAAG GCCAAGACGC CGGCCGAGCT CGTCTCGTTC
GCCGAAGAGC TGGGGGTCGA GAATGCCAGC ACGATGCGCA AGCAGGAGCT GATGTTCGCC
TGCCTGAAGC AACTGTCGGC CAAGGAAACC GATATCATCG GTGAAGGCGT CGTCGAGGTT
CTGTCCGACG GCTTCGGCTT CCTGCGTTCG CCCGATGCCA ACTATTTGCC GGGTCCGGAC
GACATCTACG TTTCGCCGTC CCAGATCCGC CGTTTTGGCC TGCGCACCGG CGACACCATC
GAGGGCCACA TCCGCAGTCC GAAGGAAGGC GAACGCTACT TCGCGCTGCT CAAGGTCAAT
ACGCTGAACT TCGAGGACCC CGAGAAGTCC AAGCACAAGG TCAATTTCGA CAATCTGACG
CCGCTGTTTC CGGACGAGCG CTTCCGGCTC GAGATCGACG ATCCGACCCG CAAGGATCTG
TCGGCGCGGG TGATCGACAT CGTGGCGCCG ATCGGCAAGG GTCAGCGCGC GCTGATCGTG
GCGCCGCCGC GCACAGGCAA GACCGTGCTG ATGCAGAACA TCGCGCATTC GATCACCGCC
AATCATCCGG AATGCTATCT GATCGTGCTG CTGATCGACG AGCGGCCGGA AGAAGTCACC
GACATGCAGC GCTCGGTGAA GGGCGAGGTG GTGTCCTCGA CCTTCGACGA ACCCGCGGTG
CGCCACGTCC AGGTCGCCGA GATGGTGATC GAGAAGGCCA AGCGGCTGGT CGAACACGGC
CGCGACGTCG TCATCCTGCT CGACTCGATC ACGCGTCTGG GCCGCGCCTA CAACACGGTG
GTGCCGTCCT CCGGCAAGGT GCTGACCGGC GGCGTCGACG CCAATGCGCT GCAGCGGCCG
AAGCGCTTTT TCGGCGCCGC GCGCAACATC GAAGAGGGCG GCTCGCTCAC CATCATCGCC
ACCGCGCTGG TCGATACCGG CTCGCGCATG GACGAAGTGA TCTTCGAAGA GTTCAAGGGC
ACGGGTAACA GCGAACTGAT CCTCGACCGC AAGGTCTCGG ACAAGCGCAC CTTCCCGGCG
ATAGACATCT CGCGCTCCGG CACCCGCAAG GAAGAGCTGA TCACCGATCC GCAACTCTTG
AAGAAGATGT ACGTGCTGCG CCGCATCCTC AATCCGATGG GCACCATGGA CGCGATCGAC
TTCCTGCTCG ACAAGCTGCG CAACACCAAG AACAACGCCG AATTCTTCGA GTCGATGAAC
ACCTGA
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| Protein sequence | MREMKLSDLK AKTPAELVSF AEELGVENAS TMRKQELMFA CLKQLSAKET DIIGEGVVEV
LSDGFGFLRS PDANYLPGPD DIYVSPSQIR RFGLRTGDTI EGHIRSPKEG ERYFALLKVN
TLNFEDPEKS KHKVNFDNLT PLFPDERFRL EIDDPTRKDL SARVIDIVAP IGKGQRALIV
APPRTGKTVL MQNIAHSITA NHPECYLIVL LIDERPEEVT DMQRSVKGEV VSSTFDEPAV
RHVQVAEMVI EKAKRLVEHG RDVVILLDSI TRLGRAYNTV VPSSGKVLTG GVDANALQRP
KRFFGAARNI EEGGSLTIIA TALVDTGSRM DEVIFEEFKG TGNSELILDR KVSDKRTFPA
IDISRSGTRK EELITDPQLL KKMYVLRRIL NPMGTMDAID FLLDKLRNTK NNAEFFESMN
T
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