| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0390 |
|---|
| Symbol | gidB |
|---|
| ID | 3908828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 433056 |
|---|
| End bp | 433769 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637882276 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_484012 |
|---|
| Protein GI | 86747516 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.477358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGC GACATTCGCC GCAGACAGCC GCCCAGCCCG ACGCTGCCGA CAAGGCGCAG
GCACTGAGGC TCACCCCCGT TTCACGTGAA ACAGAGACGC GGCTCGATGC CTATCTGGAT
CTGCTCCGCC TGTGGCAGGC CAAGACCAAT CTGGTGGCGC CGTCGACGCT GCCGCAGCTC
TGGACCCGGC ATGTCGCCGA CTCGCTTCAG CTCCTTGCGC TCGCGCCGAC GGCGCGGCGC
TGGCTCGATT TCGGGAGCGG CGGCGGCTTC CCCGGCATCG TGCTGGCCTG CGCAATGGCC
GAGCACGACG GCGGCCACGT CACGCTGGTC GAGCGCAACG CCAAGAAGGC CGCTTTCTTG
CGCGAGGCGC TGCGCGTCAC CGGCGCGCCG GGCACAGTTA TGCTCGCGGA CATTGGGGAT
AACGTGGATA GGTTCCCGCG GGCGCTCGAT TGCATCACCG CGCGTGCCGT TGCTCCGCTA
CACCAGCTCA TCGGTTTCGC CGCGCCGCTG ATGACCGAGG GCAGCAAGGT GCTGTTTCTC
AAGGGTCAAG ATGTAGAAGC GGAATTGACG GAAGCTACTA AGTATTGGAA GATCGAGCCC
CAATTGCACG CCAGCCTGAC CGGCGGGCAG GGCTGGATCG TCGAACTCGA CCGCATCGTC
CGACACGCCC CCTCCACCAC CAACCCAGAA GCCGCCGCGC ATGACCGTCA TTGA
|
|---|
| Protein sequence | MASRHSPQTA AQPDAADKAQ ALRLTPVSRE TETRLDAYLD LLRLWQAKTN LVAPSTLPQL
WTRHVADSLQ LLALAPTARR WLDFGSGGGF PGIVLACAMA EHDGGHVTLV ERNAKKAAFL
REALRVTGAP GTVMLADIGD NVDRFPRALD CITARAVAPL HQLIGFAAPL MTEGSKVLFL
KGQDVEAELT EATKYWKIEP QLHASLTGGQ GWIVELDRIV RHAPSTTNPE AAAHDRH
|
|---|
| |