| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0383 |
|---|
| Symbol | |
|---|
| ID | 3908821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 423846 |
|---|
| End bp | 424511 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637882269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484005 |
|---|
| Protein GI | 86747509 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.69916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG GCCCGGTTCA GGGGCTGGCC GCCGTCGAGC AGGAGATTGC CCGGGCCTGC
CAGGAGGCGC GCCGCGACCG CGATTCGGTG ACGCTGATCG CGGTGTCGAA GACGTTCGAG
GCCGACGCCA TCCTGCCGGT GCTGGCCGCC GGGCAACGGG TGTTCGGCGA GAACCGCGTC
CAGGAGGCCA AGGCCAAATG GCCGCCGCTG CTGGAGAGCC ATCCCGACAC CGCGCTGCAT
CTGATCGGGC CGCTGCAATC CAACAAGGCC AAGGAGGCGG TCGCGCTGTT CGACGCGATC
CATTCGGTCG ATCGCGAGAG CCTGTGCGAG GCGCTCGCCA AGGTGTTGCC GGCCTCCGGC
CGCGCGGTCG AATTGTTCGT CCAGATCAAT ACCGGCGAGG AGCCGCAGAA AGCTGGAATC
GCGCCGCAGG ACGCCGATGC GTTCATCGCC GCCTGCCGCG ACCGCTTCGG GCTCACCATC
GCCGGGCTGA TGTGCATCCC TCCGGTCGAC GAAGCCCCGG CGCCGCATTT CGCGCTGACG
GCCAAGATCG CCAAACGCAA CGGCCTGGCG AAACTGTCGA TGGGCATGAG CTCCGACTTC
GCCACCGCGA TCGCATTCGG CGCCACGCAT GTGCGGGTCG GTTCGGCGAT CTTCGGGCAT
CGGTAG
|
|---|
| Protein sequence | MSAGPVQGLA AVEQEIARAC QEARRDRDSV TLIAVSKTFE ADAILPVLAA GQRVFGENRV
QEAKAKWPPL LESHPDTALH LIGPLQSNKA KEAVALFDAI HSVDRESLCE ALAKVLPASG
RAVELFVQIN TGEEPQKAGI APQDADAFIA ACRDRFGLTI AGLMCIPPVD EAPAPHFALT
AKIAKRNGLA KLSMGMSSDF ATAIAFGATH VRVGSAIFGH R
|
|---|
| |