Gene RPB_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0380 
Symbol 
ID3908818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp421639 
End bp422085 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID637882266 
Productcyclic nucleotide-binding domain-containing protein 
Protein accessionYP_484002 
Protein GI86747506 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AAGATGATGT TGCCCTGCTC GAGCGCGTCC CGACGCTGCG GCTGTTGGGC 
GACACCTCGT TGCGGATGCT GGCGATCGGC TCGGATCAGC GCGACTTCGC GCGCGGCGAC
GTGCTGTTCA ACGCCGGCGA TGCGTCGGAC GCCGGCTATG TGGTGCAGAG CGGCGCGTTC
CAGGTGACGT CGGAGGACGG CGGCCCGCAC GAACTGATCG CGCGGCCGGG CGACCTGATC
GGCGAACTGG CGCTGGTGCT GCCGATGCCG CGGCCCTCCA GCGCGGTGGC GCTGGAATAT
TCCTCGGTGA TCCGGATCGC CCGCAGCCTG TTTCAGCGCG TGCTCGAAAG CGACCCCGCC
GCGGCGAAGC GCCTGCGCGA CGAATTCGCC GCCCGCACCA CCACCATCGC CCGCGACATC
CTGCGCGCCG GCGCCAAGCT GACGTAG
 
Protein sequence
MSIEDDVALL ERVPTLRLLG DTSLRMLAIG SDQRDFARGD VLFNAGDASD AGYVVQSGAF 
QVTSEDGGPH ELIARPGDLI GELALVLPMP RPSSAVALEY SSVIRIARSL FQRVLESDPA
AAKRLRDEFA ARTTTIARDI LRAGAKLT