Gene RPB_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0370 
Symbol 
ID3908636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp411182 
End bp412057 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID637882256 
Productacyl-CoA thioesterase II 
Protein accessionYP_483992 
Protein GI86747496 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAAAA GCCTGATCGA CCTGATCTCG ATCCTCGATC TCGAACCGCT CGAGGTGAAC 
CTGTTCCGCG GCACCAGCCC GCAGACCAGC TGGCAGCGGG TGTTCGGCGG CCAGGTGATC
GGCCAGGCGA TGGTCGCCGG CTGCCGCACC GTCGAAAACC GGCTGCCGCA TTCGCTGCAC
TGCTATTTCA TCCTGCCGGG CGATCCGGCG GTGCCGATCA TCTACGAGGT CGAGCGGCTG
CGCGACGGCA AGAGCTACAC CACCCGCCGC GTCACCGCGA TCCAGCACGG CCAGGCGATC
TTCTCGCTGA TGATGTCGTT CCACGACGAC GAGGAGACCG AGTTCGACCA TCAGGACAAG
ATGCCCGACG TGCCGCCGCC GGAGGCGCTG TCGGCCGAAG AGATCGTCAA GCAGCCGTTC
TTCAAGGAGA TGCCGGACTT CATCAAGCGC TACTACGAGA GCGACCGGCC GATCGAGTTG
CGCCCGGTCG AGCTGTCGCG CTATTTCGGC CAGAAGATCG AAGACGGCCG CATCCACGTC
TGGATTCGCA CCGCCGCCAA GCTGCCGGAC GACCCGGCGC TGCATATGTG CGCGCTGGCC
TATGCGTCGG ACTTCTCGCT ACTCGACGCG GTGATGGCAC GCTACGGCCG CACGCTGTTC
GACAAGCGGA TGATGCCGGC CAGCCTCGAC CACGCGATGT GGTTCCACCG CCCGTTTCGC
GCCGACGAAT GGCTGCTTTA CGTTCAGGAC TCCCCGTCCG CCCAGAGCGG CCGCGGCCTG
ACCCGCGGCA TGATCTACAA GGCCGACGGC ACCCTGGTGG CCTCGGTCGC CCAGGAGGGC
TCGGTGCGGC AGCGACGAGA CCTGCCGCGG ACGTAG
 
Protein sequence
MSKSLIDLIS ILDLEPLEVN LFRGTSPQTS WQRVFGGQVI GQAMVAGCRT VENRLPHSLH 
CYFILPGDPA VPIIYEVERL RDGKSYTTRR VTAIQHGQAI FSLMMSFHDD EETEFDHQDK
MPDVPPPEAL SAEEIVKQPF FKEMPDFIKR YYESDRPIEL RPVELSRYFG QKIEDGRIHV
WIRTAAKLPD DPALHMCALA YASDFSLLDA VMARYGRTLF DKRMMPASLD HAMWFHRPFR
ADEWLLYVQD SPSAQSGRGL TRGMIYKADG TLVASVAQEG SVRQRRDLPR T