| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0361 |
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| Symbol | |
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| ID | 3908627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 403466 |
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| End bp | 404368 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882247 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_483983 |
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| Protein GI | 86747487 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.713326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA GCCACACCGA TCAATTCGAC GTGCCGGAAC TGTCGGCGGA GGACATTCAG
TCGCGGGTGC TGCATCGCGA CGGGCTGATG CTGGTGATCG ACAAGCCGCC CGGCCTGCCG
GTGCATCGCG GCCCGAAGGG CGGGCCCAAT CTGGAAACCT CGTTCGAGTT CCTGCGGTTC
GGCCTGCCGC GCCCGCCGGT GCTGGCGCAT CGGCTCGACC GCGACACCTC CGGCTGTCTG
GTGCTCGGCC GCCACCGCAA GGCCACCGCC ACGCTGGGGC TGCTGTTCAA GCACAGCAAG
ATTTCCAAGA CCTATTGGGC GATCGTGGAG GGCGGGCCTC TGGAGGACCA GGGCACCATC
GACCTGCCGA TCGGCCGCCT CAACGCCGAG CGCGGCTGGT GGCAGAAGAT CGATCCGGAA
GGCCTGCCGT CGCTGACGAA ATGGACGGTG CTGGGGAGGT CCTTCTCCCC TCCCCCTTGC
GGGGCGGGAG CCTGCCCCGG ACTTGATCCG GGGGCGGGGG TCGACAACGG GAGCCTCGCT
TCGGGGCACC CTCACCCCAA CCCTCTCCCG CAAGCGGGAG AGGGGGCTCG CAGTGCTGGG
GGCGCTGCTG CGGCCTCATC TCCGGCGCAG GCAGAAGACC CGCCGCCTCT CACCTGGCTC
GCGCTGGAGC CGATCACCGG GCGGACGCAT CAATTGCGGG TGCATTGTGC GGCGATGGGC
TGGCCGATCT TCGGCGACAA CATCTACGGC AACGGCCCGC GCTTCGGCGA GCCGAAGTTG
CATCTGCACG CCCGCGAGAT CACCATCCCG CTGTCGCGCA ACAAGCCGCC GGTGGTGGTG
ACGGCGCCGC CGCCGCCGCA CATGCATCCG CGGCTGGCGG CCTGCGGGTG GACGGGCGTG
TAG
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| Protein sequence | MNESHTDQFD VPELSAEDIQ SRVLHRDGLM LVIDKPPGLP VHRGPKGGPN LETSFEFLRF
GLPRPPVLAH RLDRDTSGCL VLGRHRKATA TLGLLFKHSK ISKTYWAIVE GGPLEDQGTI
DLPIGRLNAE RGWWQKIDPE GLPSLTKWTV LGRSFSPPPC GAGACPGLDP GAGVDNGSLA
SGHPHPNPLP QAGEGARSAG GAAAASSPAQ AEDPPPLTWL ALEPITGRTH QLRVHCAAMG
WPIFGDNIYG NGPRFGEPKL HLHAREITIP LSRNKPPVVV TAPPPPHMHP RLAACGWTGV
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