| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0348 |
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| Symbol | |
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| ID | 3908614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 391132 |
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| End bp | 392544 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637882234 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_483970 |
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| Protein GI | 86747474 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTG CAAAACCCAC CACGCTGTAC GACAAGATCT GGAACGACCA TCTGGTGCAC
GAGGCCGAGG ACGGCACCTG CCTGCTGTAT ATCGACCGTC ATCTGGTGCA CGAAGTGACC
AGCCCGCAGG CCTTCGAAGG GCTGCGCACC GCCGGCCGCA AGGTCCATGC GCCGGAGAAG
ACGCTGGCGG TGGTCGATCA CAACGTGCCG ACCACCGATC GCTCCAAGCC TAATCCGGAT
CCGGAGAGCG CCGAGCAGAT CGCCGCTCTG GCCGAGAACG CCCGCGACTT CGGCGTCACC
TACTACAACG AGTTCGACAA GCGGCAGGGC GTGGTCCACG TCATCGGCCC GGAGCAGGGC
TTCACGCTGC CCGGCACCAC CATCGTCTGC GGCGACAGCC ACACCTCGAC GCATGGCGCG
TTCGGCGCGC TGGCGCACGG CATCGGCACC TCCGAGGTCG AGCACGTCCT CGCCACCCAG
ACGCTGATCC AGAAGAAGGC CAAGAACATG CGCGTGACCG TCGACGGCGA TCTGCCGGAC
GGCGTCACCG CCAAGGACAT CATCCTGGCC ATCATCGGCG AGATCGGCAC CGCGGGTGGC
ACCGGCTACG TGCTGGAATA CGCCGGCGAT GCGATCCGCG CGCTGTCGAT GGAAGGCCGC
ATGACGGTCT GCAACATGTC GATCGAAGGC GGCGCCCGCG CCGGCCTGAT CGCGCCCGAT
GAGAAGGCCT ATGCGTACTT GAAGGGCCGC CCGATGGCGC CGACCGGCGC CCATTGGGAC
GCCGCGATGC GCTATTGGGA CACGCTGCGT TCCGACGAGG GCGCGCATTT CGACCACGAA
CTCCGGCTCG ATGCCGCAGC GCTGCCGCCG ATCGTGACCT GGGGCACCTC GCCCGAAGAC
GTCATCTCGG TCACCGGAAA GGTGCCGAAC CCGGCCGACA TCGCCGACGA GGCCAAGCGG
CTCTCCAAAG AGCGCGCGCT GGCCTATATG GGGCTGACGC CGGGGACGAA GATCACCGAC
ATCAAGATCG ACCGGATGTT CATCGGTTCC TGCACCAACG GCCGGATCGA GGATCTGCGC
GCCGCCGCCA AGGTCGCCGA GGGCAAGACC GTCAACGCCA ATGTCAACGC CATCATCGTG
CCGGGCTCCG GGCTGGTGAA GGAACAGGCC GAGGCCGAGG GGCTGGACAA GATCTTCGTC
AAGGCCGGCT TCGAATGGCG TGAGCCGGGC TGCTCGATGT GCCTCGCCAT GAACCCCGAC
AAGCTCGCCC CGGAAGAGCG CTGCGCCTCG ACCTCGAACC GCAATTTCGA AGGCCGTCAG
GGCTTCAAGG GCCGCACCCA TCTGGTGTCG CCTGCGATGG CGGCGGCGGC GGCGATCGCC
GGCCACTTCG TCGACATCCG CGACTGGCGC TGA
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| Protein sequence | MSAAKPTTLY DKIWNDHLVH EAEDGTCLLY IDRHLVHEVT SPQAFEGLRT AGRKVHAPEK
TLAVVDHNVP TTDRSKPNPD PESAEQIAAL AENARDFGVT YYNEFDKRQG VVHVIGPEQG
FTLPGTTIVC GDSHTSTHGA FGALAHGIGT SEVEHVLATQ TLIQKKAKNM RVTVDGDLPD
GVTAKDIILA IIGEIGTAGG TGYVLEYAGD AIRALSMEGR MTVCNMSIEG GARAGLIAPD
EKAYAYLKGR PMAPTGAHWD AAMRYWDTLR SDEGAHFDHE LRLDAAALPP IVTWGTSPED
VISVTGKVPN PADIADEAKR LSKERALAYM GLTPGTKITD IKIDRMFIGS CTNGRIEDLR
AAAKVAEGKT VNANVNAIIV PGSGLVKEQA EAEGLDKIFV KAGFEWREPG CSMCLAMNPD
KLAPEERCAS TSNRNFEGRQ GFKGRTHLVS PAMAAAAAIA GHFVDIRDWR
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