Gene RPB_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0306 
Symbol 
ID3908685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp347080 
End bp347961 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID637882190 
Productrhodanese-like protein 
Protein accessionYP_483928 
Protein GI86747432 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.222943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA AGGTTCTTGT CACGCCCGCC GAACTCTCCG AAATGCTTGC CTCCCCGACC 
ACCGTGGTGA TCGACACCCG CAATCCCGAA GCCTATGCGG CCGGCCACGT TCCCGGCGCC
GTCAACATCC ACGAGATCTT CACGTACCTC GCGACCTCGA CGCCCGAGGG CGTCAAGGAG
ATGAGCGAGA AGTTCGCTGC CGCGTTCGGC GCCGCCGGCC TGTCCGGTGA AGAGACCGCG
GTGATCTACG AACAGTCGAT GAACACCGGC TTCGGCCAAT CCTGCCGCGG CTATGTGCTG
CTGACCTATC TGGGCTATCC GAAGGTCAAG ATCCTGCATG GTGGCTACGC GGCCTGGACC
GCGGCCGGCC TGCCGAGCAC CACCGATGTG CCGACGCCGA CGCCGAAGAC GTTCGCGGTC
GATCCGGAAG CGGCCTCGAT CCTGGTCGAT CTGGAATCGA TGAAGGCGGC GGTCGCGGAC
CAGTCCAAGG TCAAGCTCGA CACCCGCGAC GTCGACGAAT GGATCGGCGA AAGCTCGTCG
CCCTACGGCA AGGACTTCTG CCCGCGCAAG GGTCGCATCC CCGGCGCGGT CTGGATCGAA
TGGTACCGCA TGATGAAGCC GTCGGCGGCC GGCCCGATGT TCAAATCGTC GGCGGAGATT
CTCGCCGAAT GCGCCAGCGT CGGTATCACG CCGGACACCC CGGTCGTCCT CTACTGCTTC
AAGGGTGCCC GCGCCTCCAA CACGCTGGTC GCGCTGAAGG AAGCCGGCAT CAAGGACGTC
AGCCTGTATT TCGGCTCCTG GAACGAATGG TCGCGCGACC CGTCGCTGCC GATCGAGGAA
GGCGCGCCCT ATGCGGCGCC GTCGCTGATG GCGGCGGAGT AA
 
Protein sequence
MTEKVLVTPA ELSEMLASPT TVVIDTRNPE AYAAGHVPGA VNIHEIFTYL ATSTPEGVKE 
MSEKFAAAFG AAGLSGEETA VIYEQSMNTG FGQSCRGYVL LTYLGYPKVK ILHGGYAAWT
AAGLPSTTDV PTPTPKTFAV DPEAASILVD LESMKAAVAD QSKVKLDTRD VDEWIGESSS
PYGKDFCPRK GRIPGAVWIE WYRMMKPSAA GPMFKSSAEI LAECASVGIT PDTPVVLYCF
KGARASNTLV ALKEAGIKDV SLYFGSWNEW SRDPSLPIEE GAPYAAPSLM AAE