| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0302 |
|---|
| Symbol | |
|---|
| ID | 3907931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 342344 |
|---|
| End bp | 344326 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637882186 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_483924 |
|---|
| Protein GI | 86747428 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.183552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCGA CCTACCGCAG CGATATCGAC GGATTGCGCG CCATCGCCGT GTTGCTGGTG
ATCGCGTTTC ATGCCTTCCC GCATTCCGTG CGCGGTGGCT TCGTCGGCGT CGACGTGTTC
TTCGTGATCT CCGGCTTCCT GATCACCTCG ATCATCTGCC AGGCCCGACG CAGCGGCGAC
TTCAGCTTCG CCGTCTTCTA TGCCCGCCGC ATCAACCGGA TCTTCCCGGC GCTGGCATTG
GTGCTGATCA CTTGCGCGGT CGCCGGCTGG TTCCTGCTGT TCCCGGTCGA CTACCGCGAC
GCCGGCAAGG CGATCGGCTT CGGCGCCGCG TTTCTCTCCA ATCTCGCGCT GCTGCACGGC
GCCGGCTATT TCGAGACCTC CTCCGAACTC GATCCGCTGC TGCATCTGTG GTCGCTCGGC
GTCGAGGAGC AGTTCTATCT GTTGTGGCCG CCGGTGATCG TGCTGGCCTG GCGGTGGCCA
CGCGGCGCGC TGATCGCCGC GCTCACGATC CTGCTGGCGT CGTTCGCCGC CAACATCGCA
CTGACGCCCG TCAACCCGCT GGCGGCGTTC TATTTGCCGG TGACGCGGTT CTGGGAATTG
ATGACCGGCT GCGTGCTCGC CCTTGCGGCG AATGCGGGGC CCGGCCGCGA CATCACCTCG
ATCGCGGCGC TCGGCGTTGT GCGGAGGCTG TTCGAACGCC ACGCGGCGGC GATCCGTGCC
GCCTGCGCCT GGTTGGGGCT GGGGCTGCTC GCCGCTGGCG CGGCGTTGAT CAGCAACGAT
CGCGGCTTCC CCGGCTGGTG GGCGGTACTG CCGGTGCTCG GCGCAGCGTT GCTGATTTTC
GCCGGACCTT CGCCCTGGGT GAGCCGGTAT CTGCTCGGCA ACCGCGCGAT GGTCTATGTC
GGGCTGATCA GCTATCCGCT GTATCTGTGG CACTGGCCGC TGCTCGCCGC GATCCGGATC
GTCCGGTTCG GTGAAGAGCC GCCGCTGCTG ATGAAGGCGA TCACGATCCT CGTCGCCTTC
GCCCTGGCGC ATCTCACCTG GCGATTCATC GAGCCGCCGT TCCGCGCGCG CCCGAGCCGC
CGCAAGACCG CGGCGGCGTT CGCCGCCGTG GCGATCGCCG GCATCGCCGG AGCCGGCATC
TATGCGGCCA GCGGATTTCC GTCACGCTTC GGGCCCGACC TGCAGGCGAT CCTCGGGGAC
CTGAACGCCG AAGCAACCGT CGCTTTTCGC GCCGGCGCAT GCTTCTTCGA AGGAAGCGCG
CAGTTTCAGG AGCAATGCGA CGACGCCACG CCCGCGGATG CGCCGCGGGT CGTGCTGTGG
GGCGATTCCC ACGCCGCGCA GCTGTATCCG GGCCTGCGCG AATGGCAGCG GGCTGATAAC
AGCTTCCGGA TCTCGCAATA TACGACGGCC GGCTGCCCGC CGATCCTCGG CCTGCCCGAC
CCGCCGTCGA AGGTCTGCGC CGCCAACAAC GCCATGGCGC TCGAGCGGCT GCGGACCTTG
AAGCCCGACA CCGTGATCAT GGTGGCGCGG CAGTGGCACG ACTATCACGG CCCCGATCGC
GACCCGCAGG CCGTCGACGA GATGATCCGC GCGACGCTCG CCGAGGTCCG GGCCACCGGC
GTCCGGCGCA TCGTGGTGGT CGGGATGTTT CCGAACTGGC GCACGCCGCC GCGACGTATT
CTCGCCGGGT ACTACCGCGC ACGGGCGGCG GGGGTGGCGA CGGCCGGGGC GATTCCGGAG
CGGGATCGCA GTCGCCATCT CGACTCGTCG CGCGCCGAGG AGAACGAAGG ACTGCGGAGG
TTCTTCGAAG CCGCAGGCGT CGCGTTCGTC TCGCCGACGT CGACCTATTG TGATCGCGAC
GGTTGTCTGC TGGCGGTGCC GCGCAGCAAC GGCACGCCGG TGGTGTACGA CGGCAGCCAC
CTGACCGCCG CAAGCTCGAT CTTCTTCGTC CGCGAAACCG CGCGCCAACT GTTCGGACGC
TGA
|
|---|
| Protein sequence | MRPTYRSDID GLRAIAVLLV IAFHAFPHSV RGGFVGVDVF FVISGFLITS IICQARRSGD
FSFAVFYARR INRIFPALAL VLITCAVAGW FLLFPVDYRD AGKAIGFGAA FLSNLALLHG
AGYFETSSEL DPLLHLWSLG VEEQFYLLWP PVIVLAWRWP RGALIAALTI LLASFAANIA
LTPVNPLAAF YLPVTRFWEL MTGCVLALAA NAGPGRDITS IAALGVVRRL FERHAAAIRA
ACAWLGLGLL AAGAALISND RGFPGWWAVL PVLGAALLIF AGPSPWVSRY LLGNRAMVYV
GLISYPLYLW HWPLLAAIRI VRFGEEPPLL MKAITILVAF ALAHLTWRFI EPPFRARPSR
RKTAAAFAAV AIAGIAGAGI YAASGFPSRF GPDLQAILGD LNAEATVAFR AGACFFEGSA
QFQEQCDDAT PADAPRVVLW GDSHAAQLYP GLREWQRADN SFRISQYTTA GCPPILGLPD
PPSKVCAANN AMALERLRTL KPDTVIMVAR QWHDYHGPDR DPQAVDEMIR ATLAEVRATG
VRRIVVVGMF PNWRTPPRRI LAGYYRARAA GVATAGAIPE RDRSRHLDSS RAEENEGLRR
FFEAAGVAFV SPTSTYCDRD GCLLAVPRSN GTPVVYDGSH LTAASSIFFV RETARQLFGR
|
|---|
| |