Gene RPB_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0288 
Symbol 
ID3907916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand+ 
Start bp326291 
End bp326908 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID637882171 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_483910 
Protein GI86747414 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.104009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0123555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGC GGGTCAAGCC CGCGTATGAC GCTGGGATTG GCGATCAGCC ACGAGTTGAA 
TTTCGCATGT CCGACCTCCT GATCCGCCCG GCCGCCGCCG CCGACCTGCC CGCCATCACC 
GCGATCTACG CCGACGCGGT GCGCACCGGC ACCGCGACCT TCGAACTGAC GCCGCCGGAT 
CTCGCCGAAA TGACGCGGCG GTTCGAAACG CTCGCCGGCG GCGGCTTTCC CTATCTGGTC 
GCGCTGCTTG GCGACCGCGT CGCCGGCTAC GCCTATGCGG GACCGTACCG GCCGCGTCCG 
GCCTATCGCT TCACCGTGGA GAACTCGGTC TATCTCGATC CGCTCGCGCA TCGCCGCGGC 
CTCGGCACCG CGCTGCTGCA CGAGCTGATC GCGCAATGCG AGGCGCGCGG CTTCCGCCAG 
ATGATCGCGG TGATCGGCGA TTCCACCAAT GCCGGCTCGG TCGCCGTGCA TCGCAAGAGC 
GGCTTCGACC TGATCGGCGT CCACCGCAAT GTCGGATTCA AATTCGGCCG CTGGCTCGAC 
ACCGTGATGA TGCAACGCGC GCTCGGCGCG GGCGGCGAGA CGGTGCCGGA GGTGGGAGCG 
GGGCCGAGCA ACGCGTGA
 
Protein sequence
MDTRVKPAYD AGIGDQPRVE FRMSDLLIRP AAAADLPAIT AIYADAVRTG TATFELTPPD 
LAEMTRRFET LAGGGFPYLV ALLGDRVAGY AYAGPYRPRP AYRFTVENSV YLDPLAHRRG 
LGTALLHELI AQCEARGFRQ MIAVIGDSTN AGSVAVHRKS GFDLIGVHRN VGFKFGRWLD 
TVMMQRALGA GGETVPEVGA GPSNA