Gene RPB_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0274 
Symbol 
ID3907902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp308513 
End bp309916 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content66% 
IMG OID637882157 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_483896 
Protein GI86747400 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.499041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.530597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACT ACGATCTCGT CATCATCGGC ACCGGCCCCG GCGGCTATGT CTGTGCGATC 
CGCGCGGCGC AGCTCGGCCT CAAGGTCGCG GTGGTCGAAA AGAACCCCAC GCTCGGCGGC
ACCTGCCTCA ATGTCGGCTG CATGCCGTCG AAGGCGCTGT TGCACGCCTC GGAGCTGTTT
GAGGAGGCCG GGCACTCCTT CGCCAAGATG GGGATCGGCG TGCCGGCGCC GACGCTCGAT
CTGCCGACGA TGATGAATTT CAAGCAGCAG GGCATCGACG GCAACGTCAA GGGCGTCGAG
TACCTGATGA AGAAGAACAA GATCGACGTG CTGGTCGGCC GCGGCAAGGT GCTCGGCACC
GGCAAGGTCG AGGTCACCGG CAATGACGGC AAGGCGCAAA CCGTCGAGAC CAAGTCGATC
GTGATCGCCA CCGGCTCGGA CGTGGCGAAG CTCAAGGGCA TCGAGATCGA CGAGAAGCGC
ATCGTGTCGT CGACCGGCGC GCTGTCGCTC GACAAGGTGC CGGGCAAGCT GATCGTGGTC
GGCGCCGGCG TGATCGGGCT CGAACTCGGC TCGGTGTGGC GCCGGCTCGG CGCCCAGGTC
ACCGTGGTCG AATTTCTCGA CCGCATCCTG CCCGGCATGG ATGCCGAGAT CGTCAAGCAG
TTCCAGCGCA TCCTCGAGAA GCAGGGTTTT GCCTTCAAGC TCGGCGCCAA GGTCACCGGG
GTCGACAGTT CGGGCAAGCA GCTCAAGGTC AGCGTCGAGG CCGCGGCCGG CGGCAATCCG
GAGACGCTCG AAGCCGACGT CGTGCTGGTC GCGATCGGCC GCGTGCCCTT CACCGAGGGG
CTCGGGCTGC AGGAAGCCGG CGTCGCGCTC GACGAGCGCG GCCGCGTGGC GATCGACGAT
CACTTCGCCA CAAGCGTCCA GGGCGTCTAT GCGATCGGCG ACGTGGTGAA GGGCCCGATG
CTGGCGCACA AGGCCGAGGA CGAGGGCGTC GCGGTCGCGG AAATCATCGC CGGCAAGGCC
GGGCACGTGA ACTACGACGT CATTCCGGGC GTGGTCTACA CCACGCCGGA AGTCTCATCC
GTCGGCAAGA CCGAGGAAGA CCTCAAGCAG GCCGGCGTCG CCTACACGGT CGGCAAATTC
CCGTTCACCG CCAACGGCCG CTCCAAGGTC AATCAGACCA CCGACGGTCT GGTGAAGATC
CTGGCCGACG CCAAGACCGA CCGCGTGCTC GGCGTGCACA TCGTCGGCCG CGAAGCCGGC
GAGATGATCC ACGAGGCCGC AGTGCTGATG GAGTTCGGCG GCTCGGCCGA GGATCTGGCA
CGGACCTGCC ACGCTCACCC CACCCGCTCC GAAGCGGTCA AGGAAGCCGC GCTTGCGGTC
GGAAAACGCG CCATCCATAT GTAA
 
Protein sequence
MANYDLVIIG TGPGGYVCAI RAAQLGLKVA VVEKNPTLGG TCLNVGCMPS KALLHASELF 
EEAGHSFAKM GIGVPAPTLD LPTMMNFKQQ GIDGNVKGVE YLMKKNKIDV LVGRGKVLGT
GKVEVTGNDG KAQTVETKSI VIATGSDVAK LKGIEIDEKR IVSSTGALSL DKVPGKLIVV
GAGVIGLELG SVWRRLGAQV TVVEFLDRIL PGMDAEIVKQ FQRILEKQGF AFKLGAKVTG
VDSSGKQLKV SVEAAAGGNP ETLEADVVLV AIGRVPFTEG LGLQEAGVAL DERGRVAIDD
HFATSVQGVY AIGDVVKGPM LAHKAEDEGV AVAEIIAGKA GHVNYDVIPG VVYTTPEVSS
VGKTEEDLKQ AGVAYTVGKF PFTANGRSKV NQTTDGLVKI LADAKTDRVL GVHIVGREAG
EMIHEAAVLM EFGGSAEDLA RTCHAHPTRS EAVKEAALAV GKRAIHM