Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0241 |
Symbol | |
ID | 3907868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 273416 |
End bp | 275425 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637882123 |
Product | cytochrome-c oxidase |
Protein accession | YP_483863 |
Protein GI | 86747367 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.515417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTACCA ATCCTGATAT CGTCAAGGCG ATCTTCGGCC GGCTGTCTCT GGAATCGCTG CCGTTGCACG AGCCGATCGT CGTCCTCACC TTCGTGGCGG TCGCGCTCGG CGGCGCCGCT CTGGTCGCGG GCCTGACCTA TTTCAAGCTG TGGGGCTATC TGTGGCGCGA GTGGTTCACC ACCGTCGACC ACAAGCGCAT CGGCATCATG TACATGATCC TCGGCATCGT CATGCTGCTG CGCGGCTTCG CCGACGCGGT GATGATGCGG GCCCAGCAGG CGATGGCCTT CAACGGCTCC GAGGGCTATC TCAACGCGCA TCACTACGAT CAGGTGTTCA CCGCCCACGG CGTGATCATG ATCTTCTTCG TGGCGATGCC GATGGTCACC GGCCTGATGA ACTACGTCGT GCCGCTGCAG ATCGGCGCCC GCGACGTGTC GTTCCCGTTC CTGAACAATT TCAGCTTCTG GATGACGACT GCCGGCGCCG TGCTGGTGAT GATCTCGCTG TTCGTCGGCG AGTTCGCCCG CACCGGCTGG CTGGCCTATC CGCCGCTGTC GAACATCGGT TACAGTCCGG ACGTCGGCGT TGACTACTAC ATCTGGGCGC TGCAGGTCGC GGGCGTCGGA ACCACATTGT CCGGCGTCAA CCTGATCTGC ACCATCGTCA AGGTGCGGGC GCCCGGCATG ACCATGATGC GGATGCCGAT CTTCACCTGG ACCTCGCTCT GCACCAACAT CCTGATCGTC GCCTCGTTTC CGGTTCTGAC CGTAGTGCTG GCGCTGCTGT CGCTCGATCG TTACGTCGGC ACCAATTTCT TCACGAACGA CTTCGGCGGC AACCCGATGA TGTACGTGAA CCTGATCTGG ATCTGGGGCC ATCCGGAGGT CTACATCCTG ATCCTGCCGG CCTTCGGGAT CTTCTCCGAA GTCACCTCGA CGTTCTCCGG CAAGCGGCTG TTCGGCTACA CCTCGATGGT CTACGCCACG GTGGTCATCA CCATCCTGTC GTACCTGGTG TGGTTGCACC ATTTCTTCAC GATGGGCTCG GGCGCCAGCG TCAACTCGTT CTTCGGCATT ACCACGATGA TCATCTCGAT CCCGACGGGC GCGAAGATGT TCAACTGGCT GTTCACGATG TACCGCGGCC GGATCCGTTA CGACCTGCCG ATGATGTGGA CGATCGCATT CATGCTGACC TTCGTGATCG GCGGCATGAC CGGGGTGCTG CTCGCGGTGC CGCCGGCCGA CTTCGTGCTG CACAACAGCC TGTTCCTGGT CGCGCATTTC CACAATGTCA TCATCGGCGG CGTGGTGTTC GGCCTGTTCG CCGGCATCGC CTACTGGTTC CCGAAGGCGT TCGGCTTCAA GCTCGACGTG TTCTGGGGCA AGATCTCGTT CTGGTGCTGG GTGGTCGGCT TCTACTTCGC CTTCATGCCG CTCTACGTGC TGGGCCTGAT GGGCGTCACC CGTCGTCTGC GGGTGTTCGA CGACCCCAGC CTGCAGATCT GGTTCATCAT CGCCGGCTTC GGCGCGTTCC TGATCCTGAT CGGCATCGTC GCGTTCCTGA TCCAGATCGC CGTCAGCGTG ATGCGACGCG AGCAGCTTCG CGACGTCACC GGCGACCCTT GGAACGGCCG CACGCTGGAA TGGGCGACGT CGTCGCCGCC GCCGGACTAC AACTTCGCCT TCACGCCGAT GGTGCGCGAT TCCGATGCGT GGTGGGACAT GAAAAAGGCT GGCTACAAGC GTCCGCTCGA AGGCTTCAAG CCGATCCACA TGCCGAGCAA TACCGGCACC GGAATCATCC TGTCCGGGCT GAGCATGGTG ATGGCGTTCG GCTTGATCTG GTACATCTGG TGGCTGGCGG CGCTGTCCTT CATCGCGCTG CTCGCCGTCG CGATCGGCCA CACCTTCAAT TATCACCGCG ACTTCCACAT CCCCGCCGAA GAGGTGGTTC GCGTCGAGGA CGAGCGGACG CGACTGCTCG CCGAGGGAGC CAAGCCATGA
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Protein sequence | MLTNPDIVKA IFGRLSLESL PLHEPIVVLT FVAVALGGAA LVAGLTYFKL WGYLWREWFT TVDHKRIGIM YMILGIVMLL RGFADAVMMR AQQAMAFNGS EGYLNAHHYD QVFTAHGVIM IFFVAMPMVT GLMNYVVPLQ IGARDVSFPF LNNFSFWMTT AGAVLVMISL FVGEFARTGW LAYPPLSNIG YSPDVGVDYY IWALQVAGVG TTLSGVNLIC TIVKVRAPGM TMMRMPIFTW TSLCTNILIV ASFPVLTVVL ALLSLDRYVG TNFFTNDFGG NPMMYVNLIW IWGHPEVYIL ILPAFGIFSE VTSTFSGKRL FGYTSMVYAT VVITILSYLV WLHHFFTMGS GASVNSFFGI TTMIISIPTG AKMFNWLFTM YRGRIRYDLP MMWTIAFMLT FVIGGMTGVL LAVPPADFVL HNSLFLVAHF HNVIIGGVVF GLFAGIAYWF PKAFGFKLDV FWGKISFWCW VVGFYFAFMP LYVLGLMGVT RRLRVFDDPS LQIWFIIAGF GAFLILIGIV AFLIQIAVSV MRREQLRDVT GDPWNGRTLE WATSSPPPDY NFAFTPMVRD SDAWWDMKKA GYKRPLEGFK PIHMPSNTGT GIILSGLSMV MAFGLIWYIW WLAALSFIAL LAVAIGHTFN YHRDFHIPAE EVVRVEDERT RLLAEGAKP
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