Gene RPB_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0236 
Symbol 
ID3907863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp269680 
End bp270213 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID637882118 
Producttwo component Fis family transcriptional regulator 
Protein accessionYP_483858 
Protein GI86747362 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGAAG AACGCTCCTT GATCGTCGTC GAGGACGACG CCGGATTCGC CCGCACGCTG 
AAGCGCTCGT TCGAGCGTCG CGGCTACGAG GTGGTGCACG CCTCGACCAT CGACGAGGTG
CGCGACGCGC TGGACGAGCG TTCGTTCGGC TACGCCGTGG TCGACCTCAA ACTCGGCGGC
GCCTCGGGGC TCGCCTGCGT CGAACTGCTG CACGCCCAGG ACCCGGAGAT GCTGATCGTC
GTTCTGACCG GCTTCGCCAG CATCGCCACC GCGGTCGAGG CGATCAAGCT CGGCGCCTGT
CACTACCTCG CCAAGCCGTC GAACACCGAC GACATCGAGG CGGCGTTCCG CAAGGCGGAG
GGCAATGCCG ACATTGCGCT GGCGAGCCAG CCGACCTCGA TCAAGACGCT GGAATGGGAA
CGCATCCATC AAACGCTGAT CGAGAGCGAA TTCAACATTT CCGAGGCTGC GCGGCGGCTC
GGCATGCATC GCCGGACCCT GGCGCGCAAG CTCGAAAAGC GGCAGGTCAG GTAG
 
Protein sequence
MIEERSLIVV EDDAGFARTL KRSFERRGYE VVHASTIDEV RDALDERSFG YAVVDLKLGG 
ASGLACVELL HAQDPEMLIV VLTGFASIAT AVEAIKLGAC HYLAKPSNTD DIEAAFRKAE
GNADIALASQ PTSIKTLEWE RIHQTLIESE FNISEAARRL GMHRRTLARK LEKRQVR