Gene RPB_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0210 
Symbol 
ID3909451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp236229 
End bp237053 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID637882091 
ProductAraC family transcriptional regulator 
Protein accessionYP_483832 
Protein GI86747336 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.85611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAC ATTCCTTGCA GATCGCCGGC GAACGAGTCT GTGCGCGCCA TGCGGCCGGC 
GTATCTTCCG CGAGTTCGAT GGGGCGATGT CAGCAGCCGG ACGAGGTCTG GTCCGGGCAC
TTGCGGAACC GCGAGCGATC GAATTTCGAT TTGAAGAAAA TGGCCGCGTT GATTCGGGCC
CTCACCGCCG AAGGTGGTGC GACGCCCGGA ATCGTGAGCG GCTTGCGGCC GCCGGCCGCG
AGCGGCGGCG AGACGGTGCT GAATTTCCGC GATCGGAGTG AAGGCCGTCC GGGCCCGGGT
GATCCGCCCT GTACGGATGA CGACCCATTA GTGATCCGGC TGTCGGAAGC ATTGGCGGCC
GCCGAGTGCG ATTCGTCGGA ATTCGCCGAC CTCTACGCCG ATGCGATCCG CGTCGTCACG
GCCGTGCGGA AGCTGAGCAT GCAGCCGCCG GCCGCGCTAA TCGAGGACCG GAAGCCGACC
GGCGGCGCGG TGTTGCCGAA GTGGCGGCTG AAGCTGGTCG CCAATTATGT CTCCGAGCAT
CTCGCGGAGA AGGTGACGCT GGCCGACATG GCGGCGGCGG CGCGGTTGAG CCGGATGCAT
TTCGCCGCAC TGTTCCTGCG CGCGACCGGG CTGCGGCCTC ATGAATATCT GCTGAAGCGG
CGCATCGCCG CGGCGCAGGA GCTGCTGCAG ACGGGCGATC TGCCGATCGT CCAGGTCGCC
ATGCAGGTCG GATTCCAGAC CCAGGCGCAC TTCACCACCG TGTTCAAGAG GATCACGGGC
CACACCCCGG CGAAGTGGCG ACAGACGATG CGGCCACACG ACTGA
 
Protein sequence
MSSHSLQIAG ERVCARHAAG VSSASSMGRC QQPDEVWSGH LRNRERSNFD LKKMAALIRA 
LTAEGGATPG IVSGLRPPAA SGGETVLNFR DRSEGRPGPG DPPCTDDDPL VIRLSEALAA
AECDSSEFAD LYADAIRVVT AVRKLSMQPP AALIEDRKPT GGAVLPKWRL KLVANYVSEH
LAEKVTLADM AAAARLSRMH FAALFLRATG LRPHEYLLKR RIAAAQELLQ TGDLPIVQVA
MQVGFQTQAH FTTVFKRITG HTPAKWRQTM RPHD