Gene RPB_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0159 
Symbol 
ID3907764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp171281 
End bp172048 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content69% 
IMG OID637882041 
Producthypothetical protein 
Protein accessionYP_483782 
Protein GI86747286 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.673519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC CCTATTGCGG CGCAGCGCCG CTTCCCGCTG AACTTTTGAG CCGATGGAAT 
GTCGATCCGG TGCTGCTGGT GGCGCTCGGC GGCGGTTGTG TGCTGCATCT CGGCCTGCTG
TGGCGCGAGC GCGAAGGCGA TCGGCGCAGC CGCATGGCGT CGGCGGCGAC CGCCTGGGCG
CTGTTGTTCG CGCTGTTCGT GTCGCCGCTG TGTGCGCTGA CCTCGGCGCT GTTTTCCGCG
CGGGTCGCGC ATCATGCCGT GATGGTCGCA ATTGCGGCGC CGTTGCTGGC GTGGTCGCTG
CCGCGCCGGC TTGTGCCACA AAGACTCGGA GCCGCGTCCG GCAGCGCGGC GTTCGTGGTG
CATCTGGTGC TGCTGTGGCT GTGGCACGCG CCGGCGCCCT ACGTCGCGGC GCTGGCCGAT
CCGGCGATGT TCTGGGTGAT GGAGCTGAGC CTGCTGGGCA GCGCGATGTG GCTGTGGAGC
GCGGTGCTGT CGCCGGCGAC GCGGCTCGGC ACCACGCTGG CGCTCTTGCT CGGCTCGGTG
GTGCAGATGG GGTTGCTCGG CGCCGTCATC ACTTTCGCGC GGACGCCGCT GTACGAGGCG
CATCTCGGCG TCACCGCGCC CTGGGGGCTG ACCGCGCTGC AGGATCAGCA GCTCGCCGGG
CTGATCATGT GGGTGCCGGC ATCGATTCCC TATTTGGCGG CGGCGTTGGC GCTGCTGGCG
AGCCGTCTCG ACCAGCCTGT CGCGACAATC GATGAAGCGG TGCGATGA
 
Protein sequence
MINPYCGAAP LPAELLSRWN VDPVLLVALG GGCVLHLGLL WREREGDRRS RMASAATAWA 
LLFALFVSPL CALTSALFSA RVAHHAVMVA IAAPLLAWSL PRRLVPQRLG AASGSAAFVV
HLVLLWLWHA PAPYVAALAD PAMFWVMELS LLGSAMWLWS AVLSPATRLG TTLALLLGSV
VQMGLLGAVI TFARTPLYEA HLGVTAPWGL TALQDQQLAG LIMWVPASIP YLAAALALLA
SRLDQPVATI DEAVR