Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0142 |
Symbol | |
ID | 3908113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 155520 |
End bp | 156386 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637882024 |
Product | inner-membrane translocator |
Protein accession | YP_483765 |
Protein GI | 86747269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCG TCCAGATCCT GATCAACGCG CTGGTGCTGG GCAGTCTCTA CGCCTGCATC GCGATCGGGT TTTCGCTGGT GTGGGGCGTG CTCAACGTCA TCAACCTGAT CCACGGCTCG TTCATCGTGC TCGGCGCCTA CCTCGCCTTC GGCCTGTACC AGTCGCTGCA TCTGTCGCCG TGGTACGCGA TCGTGGTCGC GGCGCCCGTG TTCTTCGTGT TCGGCTACAT CGTGCAGCGG CTGATCCTCA ACCGGGTCAT CACCGCGCCG GTGCTGGTGA CGCTGACGCT GACCTTCGGG CTCGATCTGA TCCTGAACAA TGCGATGATC TATGTCTTCA CCGCCGATTA TCGCCGCCTG ACGCTGATTC CGCCGCTCGG CTCGGTGTCG TTCGAGGGCG TGGTGGTTCC GGTCGACCGG CTGATCGCGA CCGCGACCGC GCTGGCGCTG ACCGGCCTGC TGTATCTGCT GCTGCGCCGC TCCAGAGTCG GCCGCGCCAT CGTCGCGGTG CGGCTCGATC GTGACGCCGC GGTGCTGATG GGCGTCCATG TACCCTCGAT CTACGCGGTT GCGTTCGGCC TCGGCGCGGC GCTGGCCGGC TGCGCCGGCG TGCTGATGGC GCTGATCTTC CCGATCTCGC CGCTGACCTC GTCGGCCTAT CTGGGCAAGG CCTTCGTGGT CTGCGTGCTC GGCGGGCTCG GCAGCGTGTC CGGCGCGCTG GCCGGCGGAA TGTTGCTGGC GCTGGTCGAA AGCGTCGGCT CGGCGTTCTT CGGCCCGGCG CACGCCACCA CGCTGTCGTT CCTGCTGTTG ATCATCTTCC TGATCCTGCG CCCGCAGGGC CTGGTCGGCC GAAAGGGCTT CGAATGA
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Protein sequence | MQAVQILINA LVLGSLYACI AIGFSLVWGV LNVINLIHGS FIVLGAYLAF GLYQSLHLSP WYAIVVAAPV FFVFGYIVQR LILNRVITAP VLVTLTLTFG LDLILNNAMI YVFTADYRRL TLIPPLGSVS FEGVVVPVDR LIATATALAL TGLLYLLLRR SRVGRAIVAV RLDRDAAVLM GVHVPSIYAV AFGLGAALAG CAGVLMALIF PISPLTSSAY LGKAFVVCVL GGLGSVSGAL AGGMLLALVE SVGSAFFGPA HATTLSFLLL IIFLILRPQG LVGRKGFE
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