Gene RPB_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0115 
Symbol 
ID3908086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp124958 
End bp126376 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content66% 
IMG OID637881997 
Productadenylate/guanylate cyclase 
Protein accessionYP_483738 
Protein GI86747242 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.904469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCA TGACCGACGT TCGACCTCTC TACACCGTGC TGCGGCAGAC CACCGAGGCC 
CCCGTCGTCG ACGCCATCGC GCATCTGATC GCCGATGGCG CCGACAGCGA GCTCAACCGC
ATCAACGTGC TGGAATTCGC GACGCGCACC GGCCTCGACG AGGAGAAGGT GATCTCCGGC
TTTCTGCATG CGGCCCAGCT CGGTCTGTTC GACATGAGCT GGAACGTGTT GTGCCCGGGC
TGCAGCGGCG TGCTCGACAG CCATCCGTCG CTGAAGGCGC TGAGGCACGA CGAATACACC
TGCGCGCTGT GTGCGAAAGC CTATGAGGCG TCGGTCGACG ATCAGGTCGA GGCCGCCTTC
ACCGTCAGTC CGGGCATCCG CCGGATCGGC GCGCACGATC CCGACAGCCT GCCGCTATGG
GACTACACCC GGCAGATGTT CTGGAGCTCC GGCATCGAGC TCGACGAGGA TGTGCTGGCG
CGGCTGTCCG ATCAGGACAC GCTGGGCGCC GCGGCGCTGC AGCCCGGCGA GACCGCCGAG
CTGTCGATCG CTCTGCCGAG CGAGTTCATC ATCGTCTTCG AGCCGGTGAC GCATTCGGCG
CAGTTCATCG ACGTCGCCGG GGAGCCGACC GACGAAGTGC AATCGCTGGC GCTGAGCTTC
GAGCGCCAGC ACCCGCTGAC GCCGACATTG TCGCTGCGGC CGGGGCCGCT GAAACTGTCG
CTGACCAACC ATGCGGACAA GCGGGTGATA CCCGCGGTCT GGGTCGCCGC AGACGCGCTG
CATACGCTGC TCGGCAAGCG CAAGCCGATC CTCACCGCGA AGCGGATGCT GACCAATCAG
ACCTTCCGCG ACGTCTTCAA GGCCGACAAC CTCAGTCCCG ACCAGCGGCT GAAGATCACC
TCGCTGACCT TCCTGTTCAC CGATCTCAAG GGCTCCACGG CGCTGTATCA GCGCGTCGGC
GACCTCAAAG CGTTCGATCT GGTGCGGGCG CATTTCCGCG CGCTGCTCGA GATCATCGCC
GCCGAAAAGG GCGCGGTGGT GAAGACCATC GGCGACGCGG TGATGGCGAC CTTCAACCGC
CCCGAGGACG CGCTCGCCGC CGCGCTGCGG ATGCGCGAGG CGATGGATGC GCTCAACGAG
GAACGCGGCA CCCGGGATCT GGTGGTGAAG ATCGGCATTC ACGAAGGCCC GTGCCTTGCG
GTGATGCTGA ACGAGCGGCA GGATTATTTC GGCCAGACCG TCAACATCGC GGCGCGCGTT
CTCGGCCTCG CCACCACCCA GGCGATTCAT CTCACCGGGG CGGTAATCGA TACGCCGGCG
GTCACCGCGA TGCTCGATCG CGAGGCGATC GCGCCGATCG AAAAGCACGC CGCGCTGCGC
GGCATTGCCG ACAAGGTGCT GGTCTATGAA ATTCCTTAA
 
Protein sequence
MKAMTDVRPL YTVLRQTTEA PVVDAIAHLI ADGADSELNR INVLEFATRT GLDEEKVISG 
FLHAAQLGLF DMSWNVLCPG CSGVLDSHPS LKALRHDEYT CALCAKAYEA SVDDQVEAAF
TVSPGIRRIG AHDPDSLPLW DYTRQMFWSS GIELDEDVLA RLSDQDTLGA AALQPGETAE
LSIALPSEFI IVFEPVTHSA QFIDVAGEPT DEVQSLALSF ERQHPLTPTL SLRPGPLKLS
LTNHADKRVI PAVWVAADAL HTLLGKRKPI LTAKRMLTNQ TFRDVFKADN LSPDQRLKIT
SLTFLFTDLK GSTALYQRVG DLKAFDLVRA HFRALLEIIA AEKGAVVKTI GDAVMATFNR
PEDALAAALR MREAMDALNE ERGTRDLVVK IGIHEGPCLA VMLNERQDYF GQTVNIAARV
LGLATTQAIH LTGAVIDTPA VTAMLDREAI APIEKHAALR GIADKVLVYE IP