Gene RPB_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0095 
Symbol 
ID3908737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp102027 
End bp103001 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID637881976 
Productalcohol dehydrogenase 
Protein accessionYP_483718 
Protein GI86747222 
COG category[R] General function prediction only
[C] Energy production and conversion 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.414698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA TACTCTGCCA GCAATATTGC GGTCCCGACG ATCTCGTTCT CACCGAGGTC 
CCCGATCCGG TCGCCGGCCC CGGCGAAGCG GTGATCGCGA TCAAGGCGGC GGCGCTGAAC
TTCTTCGACA TCCTGATGAT TCAGGGCAAG TACCAGATCA AACCGCCGTT TCCGTTCTCG
CCGGGCGCTG AAGTCGCGGG CGTGATCGAG AGCATCGGCG AAGGCGTCAC CGATCTGAAA
GTCGGCGACC GCGTGGTGGC GTCCTGCGGC CACAACGGCG CCCGCGAGAA GATCGCGCTT
CCGGCCTCGG CGATCATCAA GATCCCGGAC AATCTCGACT ACGACCGCGC CGCGGGCATC
ATCATCATCT ACGGCACGGC GCTGCATGCG CTGGACGATC GCGCCAGCCC GAAGCCGGGC
GAAACGCTGG CCGTGCTCGG CGCCGCCGGC GGCACCGGGC TTGCGGCCTG CGAGCTCGGC
AAGCTGATGG GCCTCAAGGT GATCGCCTGC GCCTCGTCGG ACGAGAAGCT GGAATTCGCC
AAACAGCACG GCGCCGAGCT GACGCTGAAC TACGCCAAGG AAGATCTGAA AGAAGGCCTG
AAGAAGCTGA CCGGCGGCAA GGGCGTCGAC ATCATCTTCG ATCCGGTCGG CGGCACGTAC
GCCGAAGCCG CCTTGCGCTC GATCGCGTGG GAAGGCCGCT TCCTGGTGAT CGGCTTCGCC
GCGGGCGACA TCCCGAAAAT GCCGCTCAAC CTCGCGCTGC TCAAGGGCTG CGACATCCGC
GGCGTGTTCT GGGGCGCCTG GACCAGGATC AACCCGGCCA AGCACCGCGC CAATCTGGAA
AAGCTGGTGC AGTGGGCCGC CGAGGGCAAG ATCTCCTCGC ATGTCGACCG CACCTTCCCG
CTGGCGCAGA CCGCCGACGC CCTCAACGTC CTCGGCGGCC GCCAGGCGAT GGGCAAGGTG
ATCCTGCATC CCTGA
 
Protein sequence
MKAILCQQYC GPDDLVLTEV PDPVAGPGEA VIAIKAAALN FFDILMIQGK YQIKPPFPFS 
PGAEVAGVIE SIGEGVTDLK VGDRVVASCG HNGAREKIAL PASAIIKIPD NLDYDRAAGI
IIIYGTALHA LDDRASPKPG ETLAVLGAAG GTGLAACELG KLMGLKVIAC ASSDEKLEFA
KQHGAELTLN YAKEDLKEGL KKLTGGKGVD IIFDPVGGTY AEAALRSIAW EGRFLVIGFA
AGDIPKMPLN LALLKGCDIR GVFWGAWTRI NPAKHRANLE KLVQWAAEGK ISSHVDRTFP
LAQTADALNV LGGRQAMGKV ILHP