| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0085 |
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| Symbol | |
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| ID | 3908727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 90170 |
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| End bp | 91924 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881966 |
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| Product | heparinase II/III-like |
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| Protein accession | YP_483708 |
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| Protein GI | 86747212 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.158685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCATCCG CTCACCGCAG ACGGATCTCG AGCCTGATCG TGGGCCGCTT CGCGCGGAAC
ATGGTGGCGC GCGCGTCGGG CGGCTCGGCG GCGCTGACGC GGCTGTGGCC GGGCCGCACC
GACCGGCTGA TCATTGCGCC GCATGATCTG CGCACCGCCG ACGCCACCCG CGCCGCCGAA
ATTTATGCCG GCCGCTTCGT GTTCGCCGGC AAGATCGTCA CCTGCCACGG CCGTTCGATC
TTCGATCTGG AGCCGCCGTC GGACGATTGG GAAGCCGCTC TGTTCGGCTT CGGCTGGCTG
CGCCATCTGC GCGCCGCCGA CACCGCGATC ACCCGCGCCA ACGCCCGCTC GCTGGTCGAC
GACTGGCTCG GCAACATGGC CCGCAACCGC ACCGTCGGAC GACGCCCCGA CGTGATGGCG
CGGCGGGTGA TTTCGCTGTT GTCGCAGGCG CCCCTGGTGC TGTCGGACAC CGACGGCAAA
TTCTATCGCC GCTATCTGCG CGGCCTGACC CGGGAGATCC GCGCGTTGCG GCTCGCGCTG
CTCGACGTGC CGGACGGCGT GGCGCGGCTG CAGGTGACGA TCGCTCTGTG CTATGCGGCG
CTCTGCCTCG CCAATCAGGC GCGCAACATC CGCGGCGCGA CCAAGCGGCT GTCCGACGAG
TTGCAGCGCC AGATCCTGCC GGATGGCGGG CATTTCTCGC GCAATCCCGG CGCGCTGATC
GACCTCTTGA TCGACCTGTT GCCGCTGCGG CAGACGTTTG CCGCGCGCAA TATCGCGCCG
CCGCCGGCGC TGTTGAACGC GATCGACCGG ATGATGCCGA TGCTGCGGTT CTTCCGCCAC
GGCGACGGCA ACATCGCGTT GTTCAACGGC ATGAGCGGCA CGCCGTCGGA TCTGCTGGCG
ACGCTGCTCG CTTATGACGA CAGCCACGGC ATCCCGATGC CGAGCATGCC GCATTCGGGC
TATCAGCGGA TCGATGCCGG CTCGACGCTG GTCATCATCG ACGCCGGACT GCCGCCGCCG
CCGAATGTCA GCCAGGACGG CCATGCCGGC TGCCTGTCGT TCGAAATGTC CTCCGGGCAA
TGCCGGATCG TCACCAATTG CGGGATGCCC AGTACGAATC GTGAGAGCTG GCGCGGCTTC
GCGCGCTCGA CGGCGGCGCA TTCCACCGTC ACCTGCCACG ACACCTCGTC CTGTCAGTTC
GTCGAACGCT CGGCGATGAA GCGCCTGCTG CAAGGGGCGC CGATCGTCAG CGGCCCGACC
CTGGTCGACA ACCGCCGCGA GGCGGTCGCG GGCGGCGTGC TGCTGACGGC CTCGCATGAC
GGCTATCGCG ACAAGTTCGG CGTGATCCAT CAGCGCGTCG TCATGGTGAA GCACGACGGC
AGCCGCGTCG ACGGCGAGGA CACGCTGTCG CCGGCGCAGG GCGGCCGCCA TCGCGCCGGG
CAGGCCGATT ATGCCGTGCG CTTCCATCTG CACCCGTCGA TCAAGGCGAG CCGGCTCGGC
GACGCGCACG GTGTGATGCT GGTGTTGCCC AATCGTGAGG TCTGGACCTT CGAGGCGCTC
GACGACAAGG TCGACCTCGA AGACAGCGTC TTCCTCGCCG GCAATGACGG GCCGCGCCGC
ACCACCCAGA TCGTGATCCG GCAGAATTCG ATCGAGGCGC CGAGCATCCG CTGGAGTTTC
ATCCGCTCCA ATACCTCGCC GCAGCAGACC TCCGCCCGCC GCGCCGCCCG CCGCGAACCG
GAATTGCCGC TGTAG
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| Protein sequence | MSSAHRRRIS SLIVGRFARN MVARASGGSA ALTRLWPGRT DRLIIAPHDL RTADATRAAE
IYAGRFVFAG KIVTCHGRSI FDLEPPSDDW EAALFGFGWL RHLRAADTAI TRANARSLVD
DWLGNMARNR TVGRRPDVMA RRVISLLSQA PLVLSDTDGK FYRRYLRGLT REIRALRLAL
LDVPDGVARL QVTIALCYAA LCLANQARNI RGATKRLSDE LQRQILPDGG HFSRNPGALI
DLLIDLLPLR QTFAARNIAP PPALLNAIDR MMPMLRFFRH GDGNIALFNG MSGTPSDLLA
TLLAYDDSHG IPMPSMPHSG YQRIDAGSTL VIIDAGLPPP PNVSQDGHAG CLSFEMSSGQ
CRIVTNCGMP STNRESWRGF ARSTAAHSTV TCHDTSSCQF VERSAMKRLL QGAPIVSGPT
LVDNRREAVA GGVLLTASHD GYRDKFGVIH QRVVMVKHDG SRVDGEDTLS PAQGGRHRAG
QADYAVRFHL HPSIKASRLG DAHGVMLVLP NREVWTFEAL DDKVDLEDSV FLAGNDGPRR
TTQIVIRQNS IEAPSIRWSF IRSNTSPQQT SARRAARREP ELPL
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