Gene RPB_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0059 
Symbol 
ID3907799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp62130 
End bp62684 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID637881940 
Producttwo component Fis family transcriptional regulator 
Protein accessionYP_483682 
Protein GI86747186 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGCCA TCCCCGAATT GAACGACCAC GCCGATCGCT CGCTGCTGAT CGTGGAGGAC 
GACAAGCCGT TCCTGGAGCG GCTGTCACGG GCGATGGAGA CCCGCGGCTT CGAGGTCACG
TCGTGTGACA GCGTCTCCAG CGGCCTCGCC CAGATCGGCA AGGCGGCGCC GGCTTTCGCC
GTGGTCGACC TGCGGCTCGG CGACGGCAAC GGCCTCGACG TGGTGTCGGC GCTGAAGAAG
GAGCGCCCGG ACGCGCGCGC CATCGTGCTC ACCGGCTACG GCAACATCGC CACCGCGGTG
ACGGCGGTGA AGATGGGCGC GGTCGACTAT CTGTCGAAGC CGGCCGATGC CGACGACGTC
GTCGCCGCTC TGCTCGCCAG CGGTACTGAG AAATCCGAGC TGCCGAACAA TCCGATGTCG
GCCGATCGCG TCCGCTGGGA GCACATCCAG CGGATCTACG AGATGTGCAA CCGCAACGTC
TCCGAAACCG CCCGTCGCCT CAACATGCAC CGCCGCACCC TGCAGCGCAT CCTCGCCAAG
CGCGCCCCGC GCTGA
 
Protein sequence
MNAIPELNDH ADRSLLIVED DKPFLERLSR AMETRGFEVT SCDSVSSGLA QIGKAAPAFA 
VVDLRLGDGN GLDVVSALKK ERPDARAIVL TGYGNIATAV TAVKMGAVDY LSKPADADDV
VAALLASGTE KSELPNNPMS ADRVRWEHIQ RIYEMCNRNV SETARRLNMH RRTLQRILAK
RAPR