Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0058 |
Symbol | |
ID | 3907798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 61107 |
End bp | 61931 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637881939 |
Product | methionine aminopeptidase, type I |
Protein accession | YP_483681 |
Protein GI | 86747185 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACG TGGACGCCTC CGACACCGCC CTGCGCAAGA CCGGGCAGAT CAAATTGCAC GGCGCCGCCG GTTTCGCCGG CATGCGCAAG GCCGGTCAGG TCGTGGCGCA ATGCCTCGAC GAACTGGTCG ACATCGTCAA ACCCGGGGTG CCGACCTCGG CGATCGACGA TTTCGTCCGC GATTTCGCCT TCAGCCACGG TGCCTTTCCG GCGACGCTGA TGTATCGCGG CTATCGCTAT TCGACCTGCA CCTCGATCAA TCACGTGGTC TGCCACGGCA TGCCGGGCGA CCGGCCGCTG AAGGAAGGCG ACATCGTCAA TGTCGACGTG ACGATGATCG TCGACGGCTG GTACGGCGAT TCCAGCCGGA TGTATCCGGT CGGTCCGATT GCGCGCAAAG CCGAGCGGCT GATCGACGTC ACCTACGAGT CGCTGCTGCG CGGCATCGCG GCGGTCAAGC CGGGCGCCAC CACCGGCGAC ATCGGGCACG CGATCCAGAG TTTCGTCGAG CCGCAGCAGA TGAGCGTGGT GCGGGATTTC TGCGGCCACG GCCTCGGCCG GCTGTTCCAC GATGAGCCGA ACATCATCCA TGTCGGCTCG CCCGGCCAGG GCGTTGTGCT GAAGCCCGGC ATGTTCTTCA CCATCGAGCC GATGATCAAT CTCGGCAAAC CCTATGTGAA GATCCTGTCC GACGGCTGGA CCGCGGTGAC CCGCGACCGC TCGCTGTCGG CGCAGTTCGA GCACTCGATC GGCGTCACCA AGGACGGCTG CGAGATCTTC ACGCTGTCGC CCAAGCAACT CGACAAGCCG CCGTTCCAGA GCTGA
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Protein sequence | MSYVDASDTA LRKTGQIKLH GAAGFAGMRK AGQVVAQCLD ELVDIVKPGV PTSAIDDFVR DFAFSHGAFP ATLMYRGYRY STCTSINHVV CHGMPGDRPL KEGDIVNVDV TMIVDGWYGD SSRMYPVGPI ARKAERLIDV TYESLLRGIA AVKPGATTGD IGHAIQSFVE PQQMSVVRDF CGHGLGRLFH DEPNIIHVGS PGQGVVLKPG MFFTIEPMIN LGKPYVKILS DGWTAVTRDR SLSAQFEHSI GVTKDGCEIF TLSPKQLDKP PFQS
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