Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0057 |
Symbol | |
ID | 3908143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 59695 |
End bp | 61008 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637881938 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_483680 |
Protein GI | 86747184 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATT TCACCCAGGC CTCCGAGGCG CTGCTGTCGG CTGCGCGTTC GGTCGGCGCT GAATTCACCG CGCCCTGGTT CTATGCCCAG CTCGGCATCA TCATCACCGC GCTCGGGGTC GGGCTCGGCG GCGGCGCGCT GATCAAGGCG CGGGTCGACC TGACCACGCT GACGATGGGC TGGCCGGTAC CGTTGCGGAC GTTCCTGCGG GTGGTGGTCG ACAGCGCCTG GACCGCGCTC TTCGCGCTGA CCCTGATCCT GGCGCGCGTG GTGATGTTGC ACGCGACCTG GCCGAGCCGC AGCTATCTGA TCGGCATCGC CGCCAAGCTG GCGCTGGCCT GGCTTCTGAT CCGGCTGGTC ACCAGCATCC TGCGCAACGC CTTCCTGATC CGGGTGGTGT CGGTCTCGGC CTGGTGCGTG GCGGCGCTCA GCATCATCGG GCAATTGTTT CCGGTGCTGG AGGCGCTGGA TTCGGTCGCG ATCGTGGTCG GCGATCTGCG GCTGTCGCCG CTGCTGGTGA TCAAACTCTG CGTGCTGCTG GCGATCGCGC TGTGGCTCGC CAATATCGCC AGCAATTTCT TCGAGGGCCG GATCAACCGG ACCGCGGACC TGACGCCGTC GGTGCAGGTG CTGCTGATCA AGCTGATGCG GATCGGCCTG ATGGTGTTCG CGATCGCGCT GACGATGAGC GCGGTCGGCA TCAATCTGCA GGCGCTGGCG GTGTTCTCCG GCGCGGTCGG CGTCGGCATC GGTTTCGGGT TGCAGAAGAT CTTCGGCAAT TTCATCTCGG GCGTGATCCT GCTCGCCGAC AAATCGGTCA AGCCCGGCGA TCTCGTCACC ATCGGCGACA GTTCCGGCAA GATCAGCGCG ATGAACACGC GCTATATTTC GGTGGCGGCC GGCGACGGCC GTGAATTCCT GATCCCGAAC GAGGATTTGA TCACCCAGAA GGTGGTCAAC TGGACCTACA CCGACAGGAA CACGCTGGTG AAGGTCGCCT TCGCCACCAA TTACGACGCC GATCCCCGCC TCGTCTGCCA GCTCGCGATC GACGTCGCGA CGAACGTGGC GCGGGCGTCG AAGGCCAAGC CGCCGGGCTG CATCCTCACC GAATTCACCG ATACGGGGAT GAAATTCGCC CTGACCTTCT GGATCGCCGA GCCGGACGGC ATGGACGCGG TCAAAAGCGA GGCGATGCTC GGGCTGTGGG ACGCGTTCAA GCGCGAGGGC ATCCGGGTGC CCTATCCGGT GCGCGAGATC CGCGTCCGCG GCGGCGCGCT GCCGGTCGAG ACTATCGTCG AGGTGCCGCG TTGA
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Protein sequence | MIDFTQASEA LLSAARSVGA EFTAPWFYAQ LGIIITALGV GLGGGALIKA RVDLTTLTMG WPVPLRTFLR VVVDSAWTAL FALTLILARV VMLHATWPSR SYLIGIAAKL ALAWLLIRLV TSILRNAFLI RVVSVSAWCV AALSIIGQLF PVLEALDSVA IVVGDLRLSP LLVIKLCVLL AIALWLANIA SNFFEGRINR TADLTPSVQV LLIKLMRIGL MVFAIALTMS AVGINLQALA VFSGAVGVGI GFGLQKIFGN FISGVILLAD KSVKPGDLVT IGDSSGKISA MNTRYISVAA GDGREFLIPN EDLITQKVVN WTYTDRNTLV KVAFATNYDA DPRLVCQLAI DVATNVARAS KAKPPGCILT EFTDTGMKFA LTFWIAEPDG MDAVKSEAML GLWDAFKREG IRVPYPVREI RVRGGALPVE TIVEVPR
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