Gene RPB_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0056 
Symbol 
ID3908142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp57528 
End bp59321 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content69% 
IMG OID637881937 
Productpotassium/proton antiporter 
Protein accessionYP_483679 
Protein GI86747183 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAC TCGACACGGT CAGCATAGCC ATCCTGCTCG GCGCGGTCCT GGTGATGGCG 
GGGATTCTGT CGAGCCTGCT GGCGCTGCGG TTCGGCGCCC CGTTGCTGCT GGTCTTTCTC
GTGCTCGGCA TGCTGGCCGG CGAGGCGGGA CCCGGCGGCC TGAAATTCGA CGATCTCTCC
ACCACCTATC TGGTCGGCTC GGTGGCGCTG GCGCTGATTC TGTTCGACGG CGGATTGCGG
ACGCGATTCT CGACCATCAA GGCGGTGCTG GCGCCGTCGA TGGGGCTAGC GACGGTCGGC
GTGCTGCTGA CCGCACTGAT CACCGCCCCG GTTGCCTATT ATGCGCTCGA CCTCAACTGG
ACCGAGGCAC TGCTGGCCGG CGCCGTGATC GCCTCCACCG ACGCCGCGGC GGTGTTCCTG
CTGGTGCATT CGCAGGGGTT GCGGCTGCGG CCGCGCGTCG GCGCGACGCT GGAGGTCGAA
TCCGGCACCA ACGATCCGTT CGCGGTGTTC CTGACGCTGA TGCTGGTCGG GCTGATCACC
CGCGGCGAGT CCTCGACCTG GTATGTCGTG GTCGAATTTC TGTGGGAGGC CCTGCTCGGC
ACCGCGATCG GCGTGATCGG CGGCCGAATG GTGGTGATGG CGCTGAATCG GGTGGCGCTG
CCGCAGGGGC TGCACGCGCC GTTCGTCGCC ACCGCGGCGC TGGTGGTGTT CGGCGCCGCG
CAGATCTCGC ACGCCTCGGG GTTCCTCGCC GTCTACCTCG CTGGCATGAT CATCGGCAAC
CAGCCGACCC GCGCGCATAA TTCGGTGGTG GCGTTCCTCG ACGCCGCGAC CTGGCTGGCG
CAGATCGTGA TGTTCGTGCT GCTCGGCCTG TTGGTGTCGC CGCAGCGGCT GATGTCGAGC
ATCGGCCCGG CGGTGGTGGT GGCGCTGGCG CTGATGCTGG TGGCGCGGCC GGTCGCCGTA
TTCCTGTGTC TGGCGCCGTT CCGGTTCAAC TGGCGGGAGC GGCTGTTCAT CGCCTGGGTG
GGGTTGCGCG GCGCGGTCGC GATCTTCCTG GCCTCGATCC CGATGCTGGT CGGGCTGCCG
AAGGCCTATC TGTATTTCGA CGTCGCCTTC GTGGTGGTGA TCATCTCGCT GCTGCTGCAG
GGCTGGACGC TGGGGCCGGC GGCGCGCAAG CTTCACGTCG CCCTGCAGCG CACCGATCGC
GGCCCGCGCC GGATCGAGCT TGACCTGCCC GGCCAGCTCG AGAAGCAACT GGTCGGCTAT
CCGGTGCGCG CCAAGAGCCT GTATCTGAAG CGCGGGCTGA TCCCGTCCTG GTCGAAGCCG
ACGCTGGTGA TCCGCGACGA GCGCATCCTG ACGCCGGAAG AGGCCGAACC GGTCGCGCCC
GGCGACTATC TGTATCTGCT GGCGCCGCCC GAAAAGGCCG AAGCGCTCGA CCGCTTCTTC
GTCGACATGC CGCCCTCGAC CGCGCCCGAC CCGCATCTGC TCGGCGATTT CATCGTGCCG
GGCGAGACCA CGCTCGGCGA TCTCGCAGCG GCCTACGGCG TCAACGTGCC GACCGGCGAG
GAGGCGCTGA CGCTGGCCGA TTATTTCGAC ATCCATCTCG ACCGCGCCCC GACCGTCGGC
GCCGAGGTGA AGCTCGACAC GATCGTCCTC GTCGCGCGCA GCCTCGGCGG CGGCCGGGTC
AATGTCGTCG GCCTGCGGCT GCCGGAAGAC GAAGACGACG CCCCGCCGCC GACGCGGGTG
CAGAAAGCCC GGCGCAAGCT GTCGAAGGTC TGGTCGCAAC TGTCCGGGGT GTGA
 
Protein sequence
MGSLDTVSIA ILLGAVLVMA GILSSLLALR FGAPLLLVFL VLGMLAGEAG PGGLKFDDLS 
TTYLVGSVAL ALILFDGGLR TRFSTIKAVL APSMGLATVG VLLTALITAP VAYYALDLNW
TEALLAGAVI ASTDAAAVFL LVHSQGLRLR PRVGATLEVE SGTNDPFAVF LTLMLVGLIT
RGESSTWYVV VEFLWEALLG TAIGVIGGRM VVMALNRVAL PQGLHAPFVA TAALVVFGAA
QISHASGFLA VYLAGMIIGN QPTRAHNSVV AFLDAATWLA QIVMFVLLGL LVSPQRLMSS
IGPAVVVALA LMLVARPVAV FLCLAPFRFN WRERLFIAWV GLRGAVAIFL ASIPMLVGLP
KAYLYFDVAF VVVIISLLLQ GWTLGPAARK LHVALQRTDR GPRRIELDLP GQLEKQLVGY
PVRAKSLYLK RGLIPSWSKP TLVIRDERIL TPEEAEPVAP GDYLYLLAPP EKAEALDRFF
VDMPPSTAPD PHLLGDFIVP GETTLGDLAA AYGVNVPTGE EALTLADYFD IHLDRAPTVG
AEVKLDTIVL VARSLGGGRV NVVGLRLPED EDDAPPPTRV QKARRKLSKV WSQLSGV