Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0056 |
Symbol | |
ID | 3908142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 57528 |
End bp | 59321 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881937 |
Product | potassium/proton antiporter |
Protein accession | YP_483679 |
Protein GI | 86747183 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAC TCGACACGGT CAGCATAGCC ATCCTGCTCG GCGCGGTCCT GGTGATGGCG GGGATTCTGT CGAGCCTGCT GGCGCTGCGG TTCGGCGCCC CGTTGCTGCT GGTCTTTCTC GTGCTCGGCA TGCTGGCCGG CGAGGCGGGA CCCGGCGGCC TGAAATTCGA CGATCTCTCC ACCACCTATC TGGTCGGCTC GGTGGCGCTG GCGCTGATTC TGTTCGACGG CGGATTGCGG ACGCGATTCT CGACCATCAA GGCGGTGCTG GCGCCGTCGA TGGGGCTAGC GACGGTCGGC GTGCTGCTGA CCGCACTGAT CACCGCCCCG GTTGCCTATT ATGCGCTCGA CCTCAACTGG ACCGAGGCAC TGCTGGCCGG CGCCGTGATC GCCTCCACCG ACGCCGCGGC GGTGTTCCTG CTGGTGCATT CGCAGGGGTT GCGGCTGCGG CCGCGCGTCG GCGCGACGCT GGAGGTCGAA TCCGGCACCA ACGATCCGTT CGCGGTGTTC CTGACGCTGA TGCTGGTCGG GCTGATCACC CGCGGCGAGT CCTCGACCTG GTATGTCGTG GTCGAATTTC TGTGGGAGGC CCTGCTCGGC ACCGCGATCG GCGTGATCGG CGGCCGAATG GTGGTGATGG CGCTGAATCG GGTGGCGCTG CCGCAGGGGC TGCACGCGCC GTTCGTCGCC ACCGCGGCGC TGGTGGTGTT CGGCGCCGCG CAGATCTCGC ACGCCTCGGG GTTCCTCGCC GTCTACCTCG CTGGCATGAT CATCGGCAAC CAGCCGACCC GCGCGCATAA TTCGGTGGTG GCGTTCCTCG ACGCCGCGAC CTGGCTGGCG CAGATCGTGA TGTTCGTGCT GCTCGGCCTG TTGGTGTCGC CGCAGCGGCT GATGTCGAGC ATCGGCCCGG CGGTGGTGGT GGCGCTGGCG CTGATGCTGG TGGCGCGGCC GGTCGCCGTA TTCCTGTGTC TGGCGCCGTT CCGGTTCAAC TGGCGGGAGC GGCTGTTCAT CGCCTGGGTG GGGTTGCGCG GCGCGGTCGC GATCTTCCTG GCCTCGATCC CGATGCTGGT CGGGCTGCCG AAGGCCTATC TGTATTTCGA CGTCGCCTTC GTGGTGGTGA TCATCTCGCT GCTGCTGCAG GGCTGGACGC TGGGGCCGGC GGCGCGCAAG CTTCACGTCG CCCTGCAGCG CACCGATCGC GGCCCGCGCC GGATCGAGCT TGACCTGCCC GGCCAGCTCG AGAAGCAACT GGTCGGCTAT CCGGTGCGCG CCAAGAGCCT GTATCTGAAG CGCGGGCTGA TCCCGTCCTG GTCGAAGCCG ACGCTGGTGA TCCGCGACGA GCGCATCCTG ACGCCGGAAG AGGCCGAACC GGTCGCGCCC GGCGACTATC TGTATCTGCT GGCGCCGCCC GAAAAGGCCG AAGCGCTCGA CCGCTTCTTC GTCGACATGC CGCCCTCGAC CGCGCCCGAC CCGCATCTGC TCGGCGATTT CATCGTGCCG GGCGAGACCA CGCTCGGCGA TCTCGCAGCG GCCTACGGCG TCAACGTGCC GACCGGCGAG GAGGCGCTGA CGCTGGCCGA TTATTTCGAC ATCCATCTCG ACCGCGCCCC GACCGTCGGC GCCGAGGTGA AGCTCGACAC GATCGTCCTC GTCGCGCGCA GCCTCGGCGG CGGCCGGGTC AATGTCGTCG GCCTGCGGCT GCCGGAAGAC GAAGACGACG CCCCGCCGCC GACGCGGGTG CAGAAAGCCC GGCGCAAGCT GTCGAAGGTC TGGTCGCAAC TGTCCGGGGT GTGA
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Protein sequence | MGSLDTVSIA ILLGAVLVMA GILSSLLALR FGAPLLLVFL VLGMLAGEAG PGGLKFDDLS TTYLVGSVAL ALILFDGGLR TRFSTIKAVL APSMGLATVG VLLTALITAP VAYYALDLNW TEALLAGAVI ASTDAAAVFL LVHSQGLRLR PRVGATLEVE SGTNDPFAVF LTLMLVGLIT RGESSTWYVV VEFLWEALLG TAIGVIGGRM VVMALNRVAL PQGLHAPFVA TAALVVFGAA QISHASGFLA VYLAGMIIGN QPTRAHNSVV AFLDAATWLA QIVMFVLLGL LVSPQRLMSS IGPAVVVALA LMLVARPVAV FLCLAPFRFN WRERLFIAWV GLRGAVAIFL ASIPMLVGLP KAYLYFDVAF VVVIISLLLQ GWTLGPAARK LHVALQRTDR GPRRIELDLP GQLEKQLVGY PVRAKSLYLK RGLIPSWSKP TLVIRDERIL TPEEAEPVAP GDYLYLLAPP EKAEALDRFF VDMPPSTAPD PHLLGDFIVP GETTLGDLAA AYGVNVPTGE EALTLADYFD IHLDRAPTVG AEVKLDTIVL VARSLGGGRV NVVGLRLPED EDDAPPPTRV QKARRKLSKV WSQLSGV
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