| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0054 |
|---|
| Symbol | |
|---|
| ID | 3908140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 56021 |
|---|
| End bp | 56614 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483677 |
|---|
| Protein GI | 86747181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTG AGACGCCATC GACGACGAAA GCGATGCTGA TGTCGCTCGG CCTCGCCACC
CTCGCCGCGA CGCCGGCGTC GGCGGCGCCG CCGCTGCAGT GTCAAGATTT CGTCAACTAC
GCGATGAAGG CCCAGGCGCA ATACTATGCG CGCGGCTGCC CACGCATCCC GTCGATGCAC
GCCAACCGCG AAGGGCATTT CCAGTGGTGC CTGAAGCGCA ACGAAGGCCA GGTCGCCGCC
GAACAGCGTG CCAAGGCGGC CACGCTGAAT TCGTGCCTGG CAGGAGCCGC GTCCCCGCCG
CGCCCGCAAT CCGCCCAGAT GCAATCCACC GCGACCCGCG AGCCGGTGTG CTCGAGCTAC
GGCCAGGCCG GCGAGAAGTG GCGCAACCGC GCAACCGCAC AGGGCTGCAA CGTCGCGGCG
ATCCCGGTGC CGCGCGGCTG GGCCAGCTAC GCCTGGGGCG CCAATCAACT GTTCAGCTAC
TGCATGGGCA CAAGCGACGC TGGCTTCCGT GGCCGCAGCG CGCAGGCGCT CGGCCACAAG
GTGCAGCTCG AGAAGGCCTG CTCGCAGCAG CTGCGCCGAC CGGTCCGGCT GTAA
|
|---|
| Protein sequence | MMIETPSTTK AMLMSLGLAT LAATPASAAP PLQCQDFVNY AMKAQAQYYA RGCPRIPSMH
ANREGHFQWC LKRNEGQVAA EQRAKAATLN SCLAGAASPP RPQSAQMQST ATREPVCSSY
GQAGEKWRNR ATAQGCNVAA IPVPRGWASY AWGANQLFSY CMGTSDAGFR GRSAQALGHK
VQLEKACSQQ LRRPVRL
|
|---|
| |