Gene RPB_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0046 
Symbol 
ID3908132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp45527 
End bp46018 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID637881927 
Producthypothetical protein 
Protein accessionYP_483669 
Protein GI86747173 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATT CGAAGCAGCC GACCTGGAAA GTGTCGCCCA GCCTGCGCCG CCATGCGCGC 
GAGTTGCGGA AGAAGTCGAC CGACGCCGAG CGGCTGATGT GGGGCGAGCT GCGCGACAAG
CGCCTCGGTG GGTTTTCGTT CAAGCGCCAG GTGCCGATCG GGCCGTTCAT CGCCGACTTT
GCCTGCCATT CGGTGAAGCT GGTGGTCGAG ATCGACGGCG GTCAGCATTT TGCGGACGCT
GCCGAGCGCG CTGACGCGGC CCGCACGGCG GCGATCGAGG CGCGCGGCTT TCGGGTGATT
CGCTTTAGCA ATGCCGACGT GATGAGTAAT CGTGACGGGG TGTTGCAGAG CATCGCGACC
GAGCTAGCGG CAAGGGCCCT CACCCCAACC CTCTCCCGCA AGCGGGAGAG GGAGCGCGCC
GCGCGCGAGG CCAAGCAGCG ACCTGACCAA ACAACTTCAA AGCAGCGTCA TTCAACGGAC
GATGCGGACT AA
 
Protein sequence
MDDSKQPTWK VSPSLRRHAR ELRKKSTDAE RLMWGELRDK RLGGFSFKRQ VPIGPFIADF 
ACHSVKLVVE IDGGQHFADA AERADAARTA AIEARGFRVI RFSNADVMSN RDGVLQSIAT
ELAARALTPT LSRKRERERA AREAKQRPDQ TTSKQRHSTD DAD