Gene RPB_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0044 
SymbolrplT 
ID3908130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp43644 
End bp44003 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID637881925 
Product50S ribosomal protein L20 
Protein accessionYP_483667 
Protein GI86747171 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0292] Ribosomal protein L20 
TIGRFAM ID[TIGR01032] ribosomal protein L20 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG TCAAACGCGG TGTGACGGCT CACGCCAAGC ATAAGAAAGT CTACAAGGCC 
GCCAAGGGTT TCCGCGGCCG CCGCAAGAAC ACCATCCGCG CCGCCAAGGC CGCGGTCGAC
AAGGCCGGCC AATACGCCTT CCGCGACCGC AAGCGCAAGA AGCGGACGTT CCGCGCGCTG
TGGATCCAGC GCATCAACGC CGCGGTGCGC CCGTTCGGCA TGACCTACAG CGTGTTCATC
AACGGCCTGT CGAAGTCCGG CATCGTCGTC GACCGCAAGG TGCTGTCGGA CCTCGCCATC
ACCGAACCGG CAGCGTTCCA GGCGATCGCC GAGAAGGCCA AGGCCGCGCT CGCGGCCTGA
 
Protein sequence
MARVKRGVTA HAKHKKVYKA AKGFRGRRKN TIRAAKAAVD KAGQYAFRDR KRKKRTFRAL 
WIQRINAAVR PFGMTYSVFI NGLSKSGIVV DRKVLSDLAI TEPAAFQAIA EKAKAALAA