Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0044 |
Symbol | rplT |
ID | 3908130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 43644 |
End bp | 44003 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637881925 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_483667 |
Protein GI | 86747171 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCG TCAAACGCGG TGTGACGGCT CACGCCAAGC ATAAGAAAGT CTACAAGGCC GCCAAGGGTT TCCGCGGCCG CCGCAAGAAC ACCATCCGCG CCGCCAAGGC CGCGGTCGAC AAGGCCGGCC AATACGCCTT CCGCGACCGC AAGCGCAAGA AGCGGACGTT CCGCGCGCTG TGGATCCAGC GCATCAACGC CGCGGTGCGC CCGTTCGGCA TGACCTACAG CGTGTTCATC AACGGCCTGT CGAAGTCCGG CATCGTCGTC GACCGCAAGG TGCTGTCGGA CCTCGCCATC ACCGAACCGG CAGCGTTCCA GGCGATCGCC GAGAAGGCCA AGGCCGCGCT CGCGGCCTGA
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Protein sequence | MARVKRGVTA HAKHKKVYKA AKGFRGRRKN TIRAAKAAVD KAGQYAFRDR KRKKRTFRAL WIQRINAAVR PFGMTYSVFI NGLSKSGIVV DRKVLSDLAI TEPAAFQAIA EKAKAALAA
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