Gene RPB_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0028 
Symbol 
ID3909711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp26356 
End bp27189 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID637881909 
Producthypothetical protein 
Protein accessionYP_483651 
Protein GI86747155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CCACGCCCAT CCTGTTCGAT CGCCGCCTGC TTGCAGCAAG GCTCGCCCGC 
GCCCGTGCGC TCGGCCCCGC GCCGTTCCTG CTCGACCGCA TCACCGAGGA GATGGCCGAG
CGGTTGCACG CGGTGCTGCG CGACTTCAAT GCGATTGCCG ATATCTGGAC GCCCGGCGAT
GCGCTGCCGG CGGAGCGCTT TCCCAACGTC AGGCATGTCG ACATCGACCC ATCCGGCGAC
GAGGCGCTCA ATCTGGCGCC CGGCTCGCTC GACCTCGCGG TGTCGGCGCT GGGGCTGCAA
TTCGCCAATG ATCTGCCCGG CGTGCTGGCG CAGATCCGCC GCGCGCTGAA GCCGGACGGG
CTGCTGCTCG CGGCGCTGAC CGGCGGCGAC ACGCTGACCG AATTGCGCCA GGCCTTCGCG
GCCGCCGAGG CCGAGATCGA AGGCGGCGTC TCGCCGCATG TCGCGCCCAC CGCCGATCTG
CGCGACCTCG GCGCGCTGCT GCAACGCGCC GGCTTCGCGC TGCCGGTCAC CGATGTCGAC
CGCGTGGTGG TGCGCTACGA CCACGCCTTC GCGCTGATGC AGGACCTGCG GCGGATGGGC
GCCGGCAATG TGCTGATCGA GCGCCGCAGG ACCCCGCTAC GCCGCGCCAC GCTGGCGCGC
ATGGCCAACA TCTACGCCGA GCGCTTCGCC GACCCCGACG GCCGCATCCG CGCCACCTTC
GAGATCATCT GGCTGTCCGG CTGGTCGCCC CACGACAGCC AGCAGCAGCC GCTGAAGCCC
GGCTCGGCGA AAGCGAGTCT GGCGGAGGCG GTGAAGCGAC TGGGCACGAA GTAA
 
Protein sequence
MTEPTPILFD RRLLAARLAR ARALGPAPFL LDRITEEMAE RLHAVLRDFN AIADIWTPGD 
ALPAERFPNV RHVDIDPSGD EALNLAPGSL DLAVSALGLQ FANDLPGVLA QIRRALKPDG
LLLAALTGGD TLTELRQAFA AAEAEIEGGV SPHVAPTADL RDLGALLQRA GFALPVTDVD
RVVVRYDHAF ALMQDLRRMG AGNVLIERRR TPLRRATLAR MANIYAERFA DPDGRIRATF
EIIWLSGWSP HDSQQQPLKP GSAKASLAEA VKRLGTK