Gene RPB_0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0024 
Symbol 
ID3909707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp23874 
End bp24752 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content67% 
IMG OID637881905 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_483647 
Protein GI86747151 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CCGCGCCCTT CAATGCCGCG CTGGTGCAGA TGCGCACCGG GCTCCTGCCC 
GGGCCGAGCC TCGAGCAGGG GACCAAGCTG ATCCGCGAGG CGGCGGCGGC GGGCGCCGAC
TACGTGCTCA CCCCCGAGGT GAGCAACATG ATGCAGCTCA ACCGCGAGGC TTTGTTCGAC
CAACTCGCCG ACGAGGACAG CGACGTATCG CTGAAGGCCT ATCGCGATCT CGCGCGCGAG
CTGAAAATTC ATCTGCATAT CGGCTCGCTG GCGCTGCGCG CGAGCCCGGA TCGGGCCGTC
AACCGCTCGT TCCTGATCGA TCCGTCGGGG ACGATTCTGG CGAGCTACGA CAAGATCCAT
ATGTTCGACA TCGATCTCGG CAATGGCGAG AGCTATCGCG AATCGGCGAA CTACCAGCCC
GGCGAAACCG CGGTGATCTC CGATCTGCCG TGGGGCCGGA TCGGGCTGAC GATCTGCTAC
GATGTGCGCT TCCCGGCGCT GTATCGCGCG CTCGCCGAAG CCGGCGCGTC GTTCATCTCC
GTGCCGGCGG CGTTCACCCG GCCGACCGGC GAGGCGCATT GGCACGTGCT GCTGCGGGCG
CGGGCCATCG AAAACGGCTG CTTCGTGTTC GCCGCCGCGC AAGGCGGGCT GCACGAGAAC
AAGCGCGAGA CCTACGGCCA TTCGCTGATC ATCGATCCGT GGGGCGTGGT GCTGGCCGAA
GGCGGCGTCG ATCCGGGCTT CGTGATGGCG CGGATCGATC CGGCCGAGGT CGGCAAGGCG
CGCGGCAAGA TCCCGTCGCT GCAGCACGGC CGCCGCTTCA CGCTGGTCGA CGCCAAAGCG
ACGCCCGACT ATCTGCATCT CGTGCGGGAG CAGACATGA
 
Protein sequence
MTETAPFNAA LVQMRTGLLP GPSLEQGTKL IREAAAAGAD YVLTPEVSNM MQLNREALFD 
QLADEDSDVS LKAYRDLARE LKIHLHIGSL ALRASPDRAV NRSFLIDPSG TILASYDKIH
MFDIDLGNGE SYRESANYQP GETAVISDLP WGRIGLTICY DVRFPALYRA LAEAGASFIS
VPAAFTRPTG EAHWHVLLRA RAIENGCFVF AAAQGGLHEN KRETYGHSLI IDPWGVVLAE
GGVDPGFVMA RIDPAEVGKA RGKIPSLQHG RRFTLVDAKA TPDYLHLVRE QT