| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0011 |
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| Symbol | |
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| ID | 3910216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 10656 |
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| End bp | 12851 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881892 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_483634 |
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| Protein GI | 86747138 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.399414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.898775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGA CCCGGGACTT CTCGCACTAC GTCAAGGACG TCGATCCGCA GACCGCGCAT
CTCGACCTCG CGGTCGAGGG CGTCAGCTGC GCCGGCTGCA TGGCCAAGAT CGAGCGCGGG
CTGTCGGCGA TTCCGGACGT GACGCTGGCC CGCGTCAACC TCACCGACCG CCGCCTCGCG
GTGGAGTGGA AGAAGGGCGC GGTGGAGCCG GCGCTGTTCA TCGATCGGCT CGCCGAACTA
GGCTACAAGG CCTATCCCTA CGAGCCGGTC CGCGCCGAGG TCGAGGAGAC CGAGCGCAGC
AAGTTCCTGC TGCGCTGCCT CGGCGTCGCC GCCTTCGCGA CCATGAACGT GATGATGCTG
TCGGTGCCGG TGTGGGTCGG CGGCGATCTC AGTCCCGAAG CACGCGATTT CTTCCACTGG
CTGTCGGCGC TGGTGGTGCT GCCCTGCGCC GCCTATGCGG GCCAGCCGTT CTTCCAGTCG
GCCTGGCGCG CGCTGAAGGC CAAGAGCGTC AACATGGACG TGCCGATCAC GATCGGCGTG
GTGCTGGCGC TGGGCATGTC GCTGGTCGAG ACCATCAATC ACGCCGAGCA CACGTATTTC
GATGCGGCGA TCATGTTGAT CGCCTTCCTG CTGGCGGGCC GCTTCCTCGA CCAGAAGATG
CGGCAGAAGA CCCGCGCGGT CGCCGGCAAT CTGGCCGCGC TGAAGGCCGA GACCGCGACC
AAATTCGTCG GTCCCGACGA AATCAGCGAA GTGCCGATCG CCGCGGTGCG CGCCGGCGAC
CTCGTGTTGC TGCGCCCGGG CGAGCGCTGC GCGGTCGACG GCAGCGTGGT CGAGGGCCGC
TCCGAGATCG ACCAGAGCCT GATCACCGGC GAGACGCTGT ATGTGAAGGC CGAGCGCGGC
ACCCAGGTCT ATGCCGGCAC GCTCAACATC TCCGGCACGC TGCGCGTGCG GGTTTCCGCG
GCGTCGGAAG GCACGCTGCT CGCCGAGATC ACCCGGCTGC TCGACCATGC GCTGCAGGCG
CGCTCGCGCT ACGTTCGGCT CGCCGATCGT GCCTCGCAGC TCTATGCGCC GGTGGTGCAC
GCCACCGCGC TGCTCACCGT GATCGGCTGG GTGCTGGCCG GCGCGAGCTG GCACGATGCC
ATCGTCATCG GCATCGCCGT GCTGATCATC ACCTGCCCCT GCGCGCTCGG TCTGGCGATC
CCCGCGGTGC AGACGGTGGC CTCGGGCGCG ATGTTCCGCG CCGGCGTGTT GCTCAATGCC
GGCGACGCAA TCGAGCGCGC CGCCGCGGTC GACACCGTCG TGTTCGACAA GACCGGCACG
CTGACGCTGC CGGAGCTCGA CGTCGTCAAC GGCGCCGGCG TGCCCGACGA GGTCTTCCAG
CTCGCCGGGC GCCTCGCGCT CGCCAGCCAT CATCCGGTCG CCGCCGCGGT GGCGCGCGCC
GCCCAGGCCA AGGCGCCGCT GCCCGGTGTC ACCGAGGAGC CCGGCCGCGG CGTCCGCGCG
CTGTTCGAGG GCGAGGAGCT GCGGCTCGGC AGCCCGGCCT TCTGCGGCGC CGATGCCGAG
GCCAACGCCA TTCTCAGCGC CGATCCGGAA GTCTCGGTGG TCGCCTTCAG CCGCGGCGAT
CGGCACACCG TGTTCGCGGT CCGGCAGTTG CTGCGGCCCG ACGCCGCCCG GACGATCGAC
GCGCTGCTCA ATCGCGGCAT CGCCGTGGAA TTGCTGTCCG GCGACCGCGA GCCGGCGGTG
CGGCATGCGG CCGACGCGCT CGGCGTCAGC GCCTGGCGCG CCGGGGTGAC GCCGGCCGAG
AAGATCGCCC ATATCGAGGC CTTGAAGGCG CAGGGGCGCG TGGTGATGAT GGTCGGCGAC
GGCATGAACG ACGCGCCGTC ACTCGCCGCC GCGCATGTGT CGATGTCGCC GATCAGCGCC
ACCCATCTCA GCCAGGCGAC CGCCGATCTG GTGTTTCTTG GCAAGGAACT TGCACCGGTA
TTGGCCGCGA TCGACTATTC GCGCAAGGCG ATGGCAGTGA TGCGGGAGAA TCTGACGCTG
GCGATCGGCT ACAATGTGCT CGCGGTGCCG ATTGCGATCG CGGGCCTCGC CACGCCGCTG
ATCGCCGCAT TGGCGATGTC CGGCTCGTCG ATCCTGGTGA TGCTGAATGC GATGCGCGCC
CGTCGGGTCC GCCTGGGGGG TGCGTCATGG AAGTGA
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| Protein sequence | MLMTRDFSHY VKDVDPQTAH LDLAVEGVSC AGCMAKIERG LSAIPDVTLA RVNLTDRRLA
VEWKKGAVEP ALFIDRLAEL GYKAYPYEPV RAEVEETERS KFLLRCLGVA AFATMNVMML
SVPVWVGGDL SPEARDFFHW LSALVVLPCA AYAGQPFFQS AWRALKAKSV NMDVPITIGV
VLALGMSLVE TINHAEHTYF DAAIMLIAFL LAGRFLDQKM RQKTRAVAGN LAALKAETAT
KFVGPDEISE VPIAAVRAGD LVLLRPGERC AVDGSVVEGR SEIDQSLITG ETLYVKAERG
TQVYAGTLNI SGTLRVRVSA ASEGTLLAEI TRLLDHALQA RSRYVRLADR ASQLYAPVVH
ATALLTVIGW VLAGASWHDA IVIGIAVLII TCPCALGLAI PAVQTVASGA MFRAGVLLNA
GDAIERAAAV DTVVFDKTGT LTLPELDVVN GAGVPDEVFQ LAGRLALASH HPVAAAVARA
AQAKAPLPGV TEEPGRGVRA LFEGEELRLG SPAFCGADAE ANAILSADPE VSVVAFSRGD
RHTVFAVRQL LRPDAARTID ALLNRGIAVE LLSGDREPAV RHAADALGVS AWRAGVTPAE
KIAHIEALKA QGRVVMMVGD GMNDAPSLAA AHVSMSPISA THLSQATADL VFLGKELAPV
LAAIDYSRKA MAVMRENLTL AIGYNVLAVP IAIAGLATPL IAALAMSGSS ILVMLNAMRA
RRVRLGGASW K
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