| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0005 |
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| Symbol | gyrB |
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| ID | 3910210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 5462 |
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| End bp | 7903 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637881886 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_483628 |
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| Protein GI | 86747132 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.974369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAC CCGCCCGGCA GCCGATCGCC GAAACCCCGT CGCCCGTTCC GGCCGAATAC
GGCGCGGAAT CGATCCGGGT GCTGAAGGGC CTCGACGCTG TCCGCAAGCG GCCGGGCATG
TATATCGGCG ACACCGACGA CGGCTCCGGC CTGCACCACA TGGTGTACGA AGTCGTCGAC
AACGCCATCG ACGAAGCGCT CGCCGGCCAC GCCACCGCGG TCGAAGTCGT GCTCAACGCC
GACGGCTCGG TGACGGTGCG CGACGACGGC CGCGGCATTC CGGTCGACAT CCACAAGGGC
GAAGGCATTT CGGCGGCCGA AGTCATCATG ACCCAGCTCC ATGCCGGCGG AAAATTCGAC
CAGAACTCCT ACAAGGTGTC CGGCGGACTG CACGGCGTCG GCGTCTCGGT GGTCAATGCG
CTGTCGAGCA AGCTGGTCCT GCGCGTGTGG CGTAACGGCA AAGAGCACAT CATCGAATTC
GCCCATGGCG ACGCGGTGGC GCCGCTGAGC GTTGTCGGCG ACGCCAATGG CCGGCGCGGC
ACCGAGGTGA CATTTTTCGC GTCGCCGGAA ACCTTCACCC ACATCGAATA CGACTTCGCG
ACGCTGGAGC ATCGCTTACG CGAACTCGCC TTCCTGAATT CCGGCGTGAA CATCGTATTG
TCCGACATGC GCCACCCGGT CGAGAAGCGC GAGGAGATGC GCTACGAGGG CGGCGTCACC
GAATTCGTCA AATATCTCGA CCGCAACAAG AAGCCGATGG TGCCGGCGCC GATCGTGCTG
GCGGCGGATC TCAACGGCAT CGGCGTCGAA GCCGCATTGT GGTGGAACGA GACCTACCAC
GAGAACGTGC TGTGCTTCAC CAACAACATC CCGCAGCGCG ACGGTGGTAC GCATCTGGCC
GGCTTCCGCG CCGCGCTGAC GCGGCAGGTC AACGGCTATG CGGACAGCAA CGCCAAGAAG
GAAAAGATCG CGCTGACCGG CGACGATTGC CGCGAAGGCC TCACCGCGGT GCTGTCGGTG
AAGGTGCCGG ATCCGAAGTT CTCGTCGCAG ACCAAGGACA AGCTGGTGTC CTCGGAAGTC
CGGCCGGTGG TCGAGAACGT GCTGAACGAA GCGCTCGCAG CCTGGTTCGA GGAACATCCC
GCCGAAGCCA AGGTCATCGT CGGCAAGGTG ATCGAAGCCG CCGCCGCCCG CGAAGCCGCG
CGAAAAGCGC GCGAGCTGAC GCGGCGCAAG GGCGCGCTGG ATATCGCCTC GCTGCCCGGT
AAGCTCGCCG ACTGCCAGGA GCGCGATCCG TCGAAATCCG AACTGTTCAT CGTCGAGGGT
GACTCCGCCG GCGGCTCCGC CAAGCAGGGC CGCAACCGCG AATTCCAGGC CGTGCTGCCG
CTGCGCGGCA AGATCCTCAA TGTCGAGCGC GCGCGCTTCG ACAAGATGCT GGGCTCCGAG
CAGATCGGCA CGCTGATCAC CGCGCTCGGC ACCGGCATCG GCCGCGACGA TTTCGACATC
GCCAAGCTGC GCTACCACAA GATCATCCTG ATGACCGACG CCGACGTCGA CGGCGCGCAC
ATCCGCACGC TGCTCTTGAC GTTCTTCTTC CGGCAGATGC CGGCTCTGAT CGAGGGCGGC
TTCCTCTACA TCGCGCAGCC GCCGCTGTAC AAAGTGACGC GCGGCAAGTC GGAGCAGTAT
CTCAAGGACG AGCGCGCGCT CGAGGAATAT CTGATCGCGA CCGGACTCGA CGATTGCGCG
TTCAAGATCG CCTCCGGCGA AGTCCGCGGC GGGCGGGATC TGCTGGCGCT GGTCGAGGAC
GCCCGCGTGA TCCGCCAGAC GCTGCACAAT CTGCACGGCC GCTACAATCG CTCGGTGGTC
GAGCAGGCGG CGATCGCCGG CGTGCTCAGC CCGCGGATCA CCAGCGACGT GGCGACCGCC
AACGAAGCCG CCGCCTATAT CGCGCGCCGG CTCGACGCGC TGGCCGACGA GGTCGAGCGC
GGCTGGATCG GCCGCTTCGT CGAAGGCGAA GGCTTCCACT TCGAGCGCAC CGTGCGCGGC
GTCAAGGACG TGGCGATGAT CGACGACGCG CTGCTCGGCT CCGCCGACGC CCGCAAGCTC
GATGAATACG CCGCCGTGCT GCAGGAGGTC TATCCGCGCC CCGGCGTGCT GCGCCGCAAG
GATGCGGAAA CCGCGATCCA CGGCCCGGTC AGCCTGTTCG AGGCGGTGAC CGACGCTGGC
CGCAAGGGCG TGGCGCTGCA GCGCTACAAA GGCCTCGGCG AGATGAACCC GAGCCAGCTC
TGGGAGACCA CGCTCGACAC CAACGCCCGC TCGCTGCTGC AGGTGAAGGT CCGCGAAGTC
GACGAAGCCG ACGACATCTT CACCAAGCTG ATGGGCGACG TCGTCGAACC CCGCCGCGAA
TTCATCCAGG AGAATTCGCT GAGCGCGACG GTGGACGTGT AA
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| Protein sequence | MTEPARQPIA ETPSPVPAEY GAESIRVLKG LDAVRKRPGM YIGDTDDGSG LHHMVYEVVD
NAIDEALAGH ATAVEVVLNA DGSVTVRDDG RGIPVDIHKG EGISAAEVIM TQLHAGGKFD
QNSYKVSGGL HGVGVSVVNA LSSKLVLRVW RNGKEHIIEF AHGDAVAPLS VVGDANGRRG
TEVTFFASPE TFTHIEYDFA TLEHRLRELA FLNSGVNIVL SDMRHPVEKR EEMRYEGGVT
EFVKYLDRNK KPMVPAPIVL AADLNGIGVE AALWWNETYH ENVLCFTNNI PQRDGGTHLA
GFRAALTRQV NGYADSNAKK EKIALTGDDC REGLTAVLSV KVPDPKFSSQ TKDKLVSSEV
RPVVENVLNE ALAAWFEEHP AEAKVIVGKV IEAAAAREAA RKARELTRRK GALDIASLPG
KLADCQERDP SKSELFIVEG DSAGGSAKQG RNREFQAVLP LRGKILNVER ARFDKMLGSE
QIGTLITALG TGIGRDDFDI AKLRYHKIIL MTDADVDGAH IRTLLLTFFF RQMPALIEGG
FLYIAQPPLY KVTRGKSEQY LKDERALEEY LIATGLDDCA FKIASGEVRG GRDLLALVED
ARVIRQTLHN LHGRYNRSVV EQAAIAGVLS PRITSDVATA NEAAAYIARR LDALADEVER
GWIGRFVEGE GFHFERTVRG VKDVAMIDDA LLGSADARKL DEYAAVLQEV YPRPGVLRRK
DAETAIHGPV SLFEAVTDAG RKGVALQRYK GLGEMNPSQL WETTLDTNAR SLLQVKVREV
DEADDIFTKL MGDVVEPRRE FIQENSLSAT VDV
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