Gene Francci3_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4529 
Symbol 
ID3907506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5406065 
End bp5407138 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID637881862 
Productmyo-inositol-1-phosphate synthase 
Protein accessionYP_483604 
Protein GI86743204 
COG category[I] Lipid transport and metabolism 
COG ID[COG1260] Myo-inositol-1-phosphate synthase 
TIGRFAM ID[TIGR03450] inositol 1-phosphate synthase, Actinobacterial type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTCGG TACGTGTCGC CATTGTCGGC GTAGGCAACT GCGCTGTCTC GCTGGTCCAG 
GGGATCGAGT ACTACCGCGA TGCCGACCCG TCAGCCCGGG TCCCCGGGCT GATGCACGTG
CGGCTGGGCG AGTACCACGT CTCGGACCTG ACATTCGTCG CCGCGTTCGA CGTGGACGCG
AAGAAAGTCG GCCGCGACCT CTCCGAGGCC ATCGCCGCCA GCGAGAACAA CACCATCAAG
ATCGCGGACG TCCCCCCACT CGGGGTCACC GTCGGCCGCG GCCACACCCT CGACGGCCTC
GGCCGCTACT ACCGGGAGAC CATCGAGGAG TCGGACGAAC CGCCGGTTGA CGTCGTCGCA
ACCCTGCGGG AGACCCGTGC CGACGTACTC GTCTGCTACC TGCCGGTCGG CTCCGAGGAC
GCCGCGAAGT TCTACGCCCA GTGCGCCATC GACGCCGGCG TCGCCTTCAT CAACTGCCTG
CCGGTGTTCA TTGCCGGGGT GCCCGAGTGG GCGGAGAAGT TCCGCGCGGC AGGCGTGCCG
ATCGTCGGCG ACGACATCAA GTCACAGGTC GGCGCGACCA TCACCCACCG GGTTCTGGCG
AAGCTCTTCG AGGACCGCGG CGTGATCCTG GATCGGACCA TGCAGCTCAA CGTCGGCGGC
AACATGGACT TCAAGAACAT GTTGGAACGC GAGCGGCTGG AGTCCAAGAA GATCTCCAAG
ACGCAGGCCG TGACCTCCCA AGTCTCCCAC GACCTCGGCA AGGACAACGT GCACATCGGG
CCGTCGGACT ACGTCGCCTG GCTGGACGAC CGCAAGTGGG CCTATGTCCG CCTCGAGGGA
CGTGCCTTCG GCGACGTGCC GCTGAACCTC GAGTACAAGC TTGAGGTATG GGACTCCCCC
AACAGCGCCG GGGTGGTCAT CGACGCGGTG CGCTGCGCCA AGATCGCACT CGACCGGGGC
ATCGGCGGCC CGGTCCTCTC CGCCTCCTCC TACTTCATGA AGTCCCCGCC GGAGCAGTAC
CGCGACAACG AGGCCCGGGA CCGGGTGGAG GCGTTCATCC GCGACGAGGG CTGA
 
Protein sequence
MGSVRVAIVG VGNCAVSLVQ GIEYYRDADP SARVPGLMHV RLGEYHVSDL TFVAAFDVDA 
KKVGRDLSEA IAASENNTIK IADVPPLGVT VGRGHTLDGL GRYYRETIEE SDEPPVDVVA
TLRETRADVL VCYLPVGSED AAKFYAQCAI DAGVAFINCL PVFIAGVPEW AEKFRAAGVP
IVGDDIKSQV GATITHRVLA KLFEDRGVIL DRTMQLNVGG NMDFKNMLER ERLESKKISK
TQAVTSQVSH DLGKDNVHIG PSDYVAWLDD RKWAYVRLEG RAFGDVPLNL EYKLEVWDSP
NSAGVVIDAV RCAKIALDRG IGGPVLSASS YFMKSPPEQY RDNEARDRVE AFIRDEG