Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4528 |
Symbol | |
ID | 3907505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5405130 |
End bp | 5405948 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881861 |
Product | PadR family transcriptional regulator |
Protein accession | YP_483603 |
Protein GI | 86743203 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAGC TGGCGGTCCT CGCCCTGCTC TCCGAGAGCC CTATGCACGG CTATGAACTG CGCAAACGGC TCGCGGCGCT CCTCGGCGCG TTCCACCGGT TCAGCTACGG CTCGCTCTAT CCCTGTCTGC GTCGTCTCGC GTCCGCCGGC TACGTCACCG CGGACGACGT CGGCGCCGCG AGCCGTCTCG GCGGGCGCAG TCGGGTCGTC TACACCTTGA CGGGCGAGGG CAAGGAGAAG CTCGCGGACC TGCTGGGCGA GGGCGGACCG TCGTCCTGGG AAGACGAGAT GTTCGGCGTG CGCTTCGCCT TCTTCTCGAA GACGGACGCC GCTGTCCGCC TCCGCATCCT CGAAGGTCGC CGCGGGCGGC TCGAGGAGCG CCGGGAGAAG GTTCGATCGG CCCTGACCCG GACCGTCGAG CGTTTCGACT CCTACACACT CGAGTTGCAG CGCCACGGCC TGGAATCGGT CGAACGTGAG GTCCGCTGGC TGAACGAGCT GATCGAGACC GAACGCGCCG GCACCCCCGT CGGCACCCAG GGACCACAGT TGTCCACAGG ATCCACAGGT TTGCCCACAA CCCCGTCCAC AGGATCCGTG CAGCCGGGGG TACCCGTCGT CGAACCAGCC CGCCCAAGCG GGCCGGGAAG CCCTCCGGCG CAGGCGGACC GCCAGGACGA CCCGCGCGCA CGGGATAGCG GCACGCCTGC CGACGGCGAC GCGCACCTGA ACGTGAACGT GAACAGGCGT GGCCGGAGCA GGCGGGCCCC GCGGACAGCC GGCCAGGACC CCGACGGCGA GGTCCCGACC ACCCGATGA
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Protein sequence | MLELAVLALL SESPMHGYEL RKRLAALLGA FHRFSYGSLY PCLRRLASAG YVTADDVGAA SRLGGRSRVV YTLTGEGKEK LADLLGEGGP SSWEDEMFGV RFAFFSKTDA AVRLRILEGR RGRLEERREK VRSALTRTVE RFDSYTLELQ RHGLESVERE VRWLNELIET ERAGTPVGTQ GPQLSTGSTG LPTTPSTGSV QPGVPVVEPA RPSGPGSPPA QADRQDDPRA RDSGTPADGD AHLNVNVNRR GRSRRAPRTA GQDPDGEVPT TR
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