Gene Francci3_4528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4528 
Symbol 
ID3907505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5405130 
End bp5405948 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID637881861 
ProductPadR family transcriptional regulator 
Protein accessionYP_483603 
Protein GI86743203 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAGC TGGCGGTCCT CGCCCTGCTC TCCGAGAGCC CTATGCACGG CTATGAACTG 
CGCAAACGGC TCGCGGCGCT CCTCGGCGCG TTCCACCGGT TCAGCTACGG CTCGCTCTAT
CCCTGTCTGC GTCGTCTCGC GTCCGCCGGC TACGTCACCG CGGACGACGT CGGCGCCGCG
AGCCGTCTCG GCGGGCGCAG TCGGGTCGTC TACACCTTGA CGGGCGAGGG CAAGGAGAAG
CTCGCGGACC TGCTGGGCGA GGGCGGACCG TCGTCCTGGG AAGACGAGAT GTTCGGCGTG
CGCTTCGCCT TCTTCTCGAA GACGGACGCC GCTGTCCGCC TCCGCATCCT CGAAGGTCGC
CGCGGGCGGC TCGAGGAGCG CCGGGAGAAG GTTCGATCGG CCCTGACCCG GACCGTCGAG
CGTTTCGACT CCTACACACT CGAGTTGCAG CGCCACGGCC TGGAATCGGT CGAACGTGAG
GTCCGCTGGC TGAACGAGCT GATCGAGACC GAACGCGCCG GCACCCCCGT CGGCACCCAG
GGACCACAGT TGTCCACAGG ATCCACAGGT TTGCCCACAA CCCCGTCCAC AGGATCCGTG
CAGCCGGGGG TACCCGTCGT CGAACCAGCC CGCCCAAGCG GGCCGGGAAG CCCTCCGGCG
CAGGCGGACC GCCAGGACGA CCCGCGCGCA CGGGATAGCG GCACGCCTGC CGACGGCGAC
GCGCACCTGA ACGTGAACGT GAACAGGCGT GGCCGGAGCA GGCGGGCCCC GCGGACAGCC
GGCCAGGACC CCGACGGCGA GGTCCCGACC ACCCGATGA
 
Protein sequence
MLELAVLALL SESPMHGYEL RKRLAALLGA FHRFSYGSLY PCLRRLASAG YVTADDVGAA 
SRLGGRSRVV YTLTGEGKEK LADLLGEGGP SSWEDEMFGV RFAFFSKTDA AVRLRILEGR
RGRLEERREK VRSALTRTVE RFDSYTLELQ RHGLESVERE VRWLNELIET ERAGTPVGTQ
GPQLSTGSTG LPTTPSTGSV QPGVPVVEPA RPSGPGSPPA QADRQDDPRA RDSGTPADGD
AHLNVNVNRR GRSRRAPRTA GQDPDGEVPT TR