Gene Francci3_4522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4522 
SymbolrpsF 
ID3907499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5396331 
End bp5396657 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content65% 
IMG OID637881855 
Product30S ribosomal protein S6 
Protein accessionYP_483597 
Protein GI86743197 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0360] Ribosomal protein S6 
TIGRFAM ID[TIGR00166] ribosomal protein S6 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.6593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACGTC ATTATGAGCT CATGGTGATC CTCGATGCTG ACCTCGAGGA ACGCACTGTC 
GCGCCCTCTC TCGACCAGTA CCTCGGTGTC GTCCGTCAGG GCGGCGGCGT GGTGGAGAAG
GTCGATGTCT GGGGGCGGCG CCGGCTCGCC TACGAGATCG CCAAGAGTCA CGAAGGCATC
TACGCCGTCA TCGACCTTCA TGCGGAGCCC GACGTCGTCG CCGAGCTCGA CCGTCAGCTC
GTCCTCAACG AGTCGGTCAT GCGCACCAAG GTCATCCGGC TTCCAGAGCC GAAGAAGCCA
CGTCAGAGCC GCCGGGCGGC GGCATGA
 
Protein sequence
MARHYELMVI LDADLEERTV APSLDQYLGV VRQGGGVVEK VDVWGRRRLA YEIAKSHEGI 
YAVIDLHAEP DVVAELDRQL VLNESVMRTK VIRLPEPKKP RQSRRAAA