Gene Francci3_4498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4498 
Symbol 
ID3907474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5370092 
End bp5371006 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content73% 
IMG OID637881830 
Productoxidoreductase FAD/NAD(P)-binding 
Protein accessionYP_483573 
Protein GI86743173 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.495478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTC GGCCGTTCCG GGTGACCCGC CGCCACCAGG AGACGGGTGA CACGTGGACC 
CTGGAACTCG CGCCGCTCTC CAACGCTCCG ATCATCGCCG CACCCGGCCA GTTCACCATG
GTCTACGCTT TCGGCGTCGG CGAGGTCCCC CTGTCCGTGA CGGGCTGCGA CCCGGCGATG
GGCGACGACT CCGTGGCGGG CGACGACTCC GTGGCGGGCG ACGACTCCGT GGCGGGCGAC
GACTCCGTGG CGGGCGACGA CTCCGTGGCG GCTGGTACCG ACAGCCCGCT TGTGCACACC
GTCCGAGCGG TCGGCGCGGT GACGGAAGCG ATCTGCGCGT CCCGCCCGGG CGACGTCCTC
GGGGTGCGTG GCCCGTTCGG GCGAGGCTGG CCGGTAGGCG CCGCAGCCGG GCTGGACGTC
GTCGTGGTCG CGGGCGGGCT CGGGCTGGCG CCGCTGCGGC CGGTCGTCCG GCAGATCCTG
CGACGGCGCG CCGACTACGG CAACGTGGTC GTGCTCGTCG GCACCCGTAC ACCCGCGGAC
ATCCTCTACC GCCGGGAGCT GGCCGGTTGG CAGGACCGCA CCGACCTCCA AGCCCTGGTG
ACCGTCGACG GTGCGCGGCC CGGATGGGAC GGCCGGGTCG GCGTCGTCAC CACCCTCCTC
CCGCACGTGC GTTTCGATCC GGCCAGAACC GTCGCGTTCA CCTGCGGACC CGAGATCATG
ATGCGGCTGA CCGCACGGGC CCTGGTCGAC GCCGGCGTAC TCGCCGACCG CATCCACCTG
TCCATGGAAC GCAACATGCA CTGCGGCCTC GGTCACTGCG GCCGCTGCCA GCTCGGCCCG
CTGATGCTCT GTCTGGACGG ACCGGTCTGC GGCTACGACC GCCTGGAACC GTTGCTCGCC
GTCCGGGAGC TGTGA
 
Protein sequence
MTPRPFRVTR RHQETGDTWT LELAPLSNAP IIAAPGQFTM VYAFGVGEVP LSVTGCDPAM 
GDDSVAGDDS VAGDDSVAGD DSVAGDDSVA AGTDSPLVHT VRAVGAVTEA ICASRPGDVL
GVRGPFGRGW PVGAAAGLDV VVVAGGLGLA PLRPVVRQIL RRRADYGNVV VLVGTRTPAD
ILYRRELAGW QDRTDLQALV TVDGARPGWD GRVGVVTTLL PHVRFDPART VAFTCGPEIM
MRLTARALVD AGVLADRIHL SMERNMHCGL GHCGRCQLGP LMLCLDGPVC GYDRLEPLLA
VREL