| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4496 |
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| Symbol | |
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| ID | 3907472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5367977 |
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| End bp | 5369269 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881828 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_483571 |
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| Protein GI | 86743171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.401222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGA CTAGGACCAT CGCACCTCCC CCACTCACCA GGGTCGAGGG CGAAGGAAGG
CTGCTAATCA AGATCACCGA CGGGCGGGTG GACGAGGCCC ACCTGAAGAT CTTCGAACCG
CCGCGCTTCT TTGAGGCGTT CCTCCGCGGC CGGGCCTACA CCGAGCCACC CGACATCACC
GCCCGGATCT GCGGCATCTG CCCGGTCGCC TACCAGATGA GCGCGCTGGC GGCCATCGAA
CAAATCTGCG ACGTCACGGT CACCGGCCCA CCCGCCGCCC TACGGCGGCT CATCTACTGC
GGTGAATGGA TCGAGAGTCA CGCACTACAC GTCTTCCTGC TGCACCTACC GGACTTCCTC
GGCTACGACA GCGCACTGCA TCTTGCCCAG GACCAGCCCG CCCTGGTCAA GCTGGGACTC
ACGCTGAAGA AGGCCGGCAA CACGCTCATG ACGGTCATCG GCGGCCGCGC GATCCACCCC
GTCAACGCGC GGGTCGGCGG CTGGTACCGG GCACCACGCC GGCGTGACCT GACCGAGCTT
GTCGGGCAAC TGGAACAGGC GCGAGACATC GCCCGGGACA CGGCCCGATT CACCGCCGCC
CTGGACTTCC CCGAAGACGA ACTCCACCAG ACCTTCGTCG CGCTCCACCA ACCTGGCGAA
TACCCCGTTG AGCGCGGCCG GATCGCCTCC ACCGCTGGCC TCGACATCGC CCCGGCCGAC
TACGACCGGC ACTTCACCGA AGAACAGGTG CCCTGGTCGA ACGCCCTGCA CTCGACCCTG
GCCGCGGGCG GCTCCTACCT CACCGGACCG CTGGCTCGCT TCGCGCTGGG CGCGGAGCGG
CTGGCGCCCG CCGCCCGCGA GACCGCCGCC GAGATCGGCC TGCGCCCACC GGAGCGCAAC
CCCTACCGCA GCATCATCGT GCGCTGCATC GAGATGGTCC ACGCCGCCGA CGAGGCGCTG
CGGATCATCG CGGACTACAC CGAGCCCGAC CCCTCCGCGC TGGAGGCCCC GCCCCGGGCG
GGAACCGGAT ACGGGGTCAC GGAGGCACCC CGCGGCCTGC TCTACCACCG CTACACGATC
GACCACAACG GCACCATCCT CGACGCAAAG ATCGTGCCAC CAACCGCCCA GAACCAACGT
CCGATCGAAG AAGACCTGCG CGGTGTGGTG GAACGCTTCA TGAACCTGTC GGAGCCCGAA
CTCGCCCTGC GCTGCGAACG GGCCATCCGC AACTACGACC CCTGCATCTC ATGTGCGACC
CACTTCCTGA CTCTCCACAT CGAACACGGC TGA
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| Protein sequence | MRATRTIAPP PLTRVEGEGR LLIKITDGRV DEAHLKIFEP PRFFEAFLRG RAYTEPPDIT
ARICGICPVA YQMSALAAIE QICDVTVTGP PAALRRLIYC GEWIESHALH VFLLHLPDFL
GYDSALHLAQ DQPALVKLGL TLKKAGNTLM TVIGGRAIHP VNARVGGWYR APRRRDLTEL
VGQLEQARDI ARDTARFTAA LDFPEDELHQ TFVALHQPGE YPVERGRIAS TAGLDIAPAD
YDRHFTEEQV PWSNALHSTL AAGGSYLTGP LARFALGAER LAPAARETAA EIGLRPPERN
PYRSIIVRCI EMVHAADEAL RIIADYTEPD PSALEAPPRA GTGYGVTEAP RGLLYHRYTI
DHNGTILDAK IVPPTAQNQR PIEEDLRGVV ERFMNLSEPE LALRCERAIR NYDPCISCAT
HFLTLHIEHG
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